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PAX4 paired box 4 [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100985809, updated on 6-Jun-2024

Summary

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Gene symbol
PAX4
Gene description
paired box 4
See related
Ensembl:ENSPPAG00000033297
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 6 NC_073255.2 (164469513..164483506, complement)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 7 NC_073256.1 (16479764..16492993, complement)

Chromosome 6 - NC_073255.2Genomic Context describing neighboring genes Neighboring gene zinc finger protein 800 Neighboring gene uncharacterized LOC134730822 Neighboring gene fascin actin-bundling protein 3 Neighboring gene ADP ribosylation factor 5 Neighboring gene staphylococcal nuclease and tudor domain containing 1 Neighboring gene CD2 antigen cytoplasmic tail-binding protein 2-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in anatomical structure development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
paired box protein Pax-4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073255.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    164469513..164483506 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003806049.5 → XP_003806097.2  paired box protein Pax-4

    UniProtKB/TrEMBL
    A0A2R9AS32, A0A2R9AYP1
    Related
    ENSPPAP00000020167.1
    Conserved Domains (2) summary
    smart00351
    Location:5 → 129
    PAX; Paired Box domain
    pfam00046
    Location:174 → 226
    Homeobox; Homeobox domain

  2. XM_055115368.2 → XP_054971343.1  paired box protein Pax-4

    UniProtKB/TrEMBL
    A0A2R9AS32, A0A2R9AYP1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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