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PHF19 PHD finger protein 19 [ Otolemur garnettii (small-eared galago) ]

Gene ID: 100959194, updated on 8-Mar-2024

Summary

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Gene symbol
PHF19
Gene description
PHD finger protein 19
Gene type
protein coding
RefSeq status
MODEL
Organism
Otolemur garnettii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lorisiformes; Galagidae; Otolemur
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
102 current OtoGar3 (GCF_000181295.1) Unplaced Scaffold NW_003852409.1 (23732197..23750158, complement)

NW_003852409.1Genomic Context describing neighboring genes Neighboring gene putative UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase LOC100288842 Neighboring gene H/ACA ribonucleoprotein complex subunit 1 pseudogene Neighboring gene proteasome 26S subunit, non-ATPase 5 Neighboring gene probable inactive 1-aminocyclopropane-1-carboxylate synthase-like protein 2 Neighboring gene TNF receptor associated factor 1 Neighboring gene 10 kDa heat shock protein, mitochondrial pseudogene Neighboring gene complement C5

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003852409 Unplaced Scaffold Reference OtoGar3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables chromatin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables methylated histone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chromatin organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
PHD finger protein 19

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Otolemur garnettii Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OtoGar3

Genomic

  1. NW_003852409.1 Reference OtoGar3

    Range
    23732197..23750158 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023510602.1 → XP_023366370.1  PHD finger protein 19 isoform X2

    Conserved Domains (3) summary
    cd15581
    Location:93 → 144
    PHD2_PHF19; PHD finger 2 found in PHD finger protein 19 (PHF19)
    pfam14061
    Location:427 → 473
    Mtf2_C; Polycomb-like MTF2 factor 2
    cl22851
    Location:30 → 46
    PHD_SF; PHD finger superfamily

  2. XM_023510601.1 → XP_023366369.1  PHD finger protein 19 isoform X1

    Conserved Domains (2) summary
    smart00333
    Location:49 → 98
    TUDOR; Tudor domain
    cd15579
    Location:109 → 161
    PHD1_PHF19; PHD finger 1 found in PHD finger protein 19 (PHF19)
Nucleotide Protein
Heading Accession and Version

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