U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SYNC syncoilin, intermediate filament protein [ Otolemur garnettii (small-eared galago) ]

Gene ID: 100941096, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
SYNC
Gene description
syncoilin, intermediate filament protein
See related
Ensembl:ENSOGAG00000030024
Gene type
protein coding
RefSeq status
MODEL
Organism
Otolemur garnettii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lorisiformes; Galagidae; Otolemur
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
102 current OtoGar3 (GCF_000181295.1) Unplaced Scaffold NW_003852599.1 (521490..543358, complement)

NW_003852599.1Genomic Context describing neighboring genes Neighboring gene zinc finger and BTB domain containing 8 opposite strand Neighboring gene RB binding protein 4, chromatin remodeling factor Neighboring gene NHS like 3 Neighboring gene tyrosyl-tRNA synthetase 1 Neighboring gene transmembrane protein 230 pseudogene

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_003852599 Unplaced Scaffold Reference OtoGar3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in intermediate filament-based process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Z disc IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in intermediate filament IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in neuromuscular junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
syncoilin

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Otolemur garnettii Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OtoGar3

Genomic

  1. NW_003852599.1 Reference OtoGar3

    Range
    521490..543358 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012812391.2 → XP_012667845.1  syncoilin isoform X2

    UniProtKB/TrEMBL
    H0XY52
    Conserved Domains (2) summary
    pfam00038
    Location:170 → 458
    Filament; Intermediate filament protein
    pfam07106
    Location:362 → 438
    TBPIP; Tat binding protein 1(TBP-1)-interacting protein (TBPIP)

  2. XM_003801257.2 → XP_003801305.1  syncoilin isoform X1

    UniProtKB/TrEMBL
    H0XY52
    Related
    ENSOGAP00000021045.1, ENSOGAT00000031734.1
    Conserved Domains (2) summary
    pfam00038
    Location:170 → 457
    Filament; Intermediate filament protein
    pfam07106
    Location:362 → 438
    TBPIP; Tat binding protein 1(TBP-1)-interacting protein (TBPIP)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.