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TLCD1 TLC domain containing 1 [ Sarcophilus harrisii (Tasmanian devil) ]

Gene ID: 100932195, updated on 8-Mar-2024

Summary

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Gene symbol
TLCD1
Gene description
TLC domain containing 1
See related
Ensembl:ENSSHAG00000014522
Gene type
protein coding
RefSeq status
MODEL
Organism
Sarcophilus harrisii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
5
Annotation release Status Assembly Chr Location
103 current mSarHar1.11 (GCF_902635505.1) 4 NC_045429.1 (435391850..435394630, complement)
102 previous assembly Devil_ref v7.0 (GCF_000189315.1) 4 Unlocalized Scaffold NW_003839011.1 (1519739..1521404, complement)

Chromosome 4 - NC_045429.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORD42 Neighboring gene small nucleolar RNA Z17 Neighboring gene ribosomal protein L23a Neighboring gene NIMA related kinase 8 Neighboring gene TNF receptor associated factor 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in membrane assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phospholipid homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plasma membrane organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of membrane lipid distribution IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TLC domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sarcophilus harrisii Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSarHar1.11 Primary Assembly

Genomic

  1. NC_045429.1 Reference mSarHar1.11 Primary Assembly

    Range
    435391850..435394630 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031967697.1 → XP_031823557.1  TLC domain-containing protein 1

    UniProtKB/TrEMBL
    A0A7N4P4T3
    Related
    ENSSHAP00000032443.1, ENSSHAT00000043795.1
    Conserved Domains (1) summary
    smart00724
    Location:40 → 205
    TLC; TRAM, LAG1 and CLN8 homology domains

  2. XM_031967696.1 → XP_031823556.1  TLC domain-containing protein 1

    UniProtKB/TrEMBL
    A0A7N4P4T3
    Conserved Domains (1) summary
    smart00724
    Location:40 → 205
    TLC; TRAM, LAG1 and CLN8 homology domains
Nucleotide Protein
Heading Accession and Version

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