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ABTB3 ankyrin repeat and BTB domain containing 3 [ Sarcophilus harrisii (Tasmanian devil) ]

Gene ID: 100927436, updated on 8-Mar-2024

Summary

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Gene symbol
ABTB3
Gene description
ankyrin repeat and BTB domain containing 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Sarcophilus harrisii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus
Also known as
BTBD11
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
18
Annotation release Status Assembly Chr Location
103 current mSarHar1.11 (GCF_902635505.1) 5 NC_045430.1 (18677682..18999892, complement)
102 previous assembly Devil_ref v7.0 (GCF_000189315.1) 5 Unlocalized Scaffold NW_003843615.1 (1646071..1985859)

Chromosome 5 - NC_045430.1Genomic Context describing neighboring genes Neighboring gene PR/SET domain 4 Neighboring gene PWP1 homolog, endonuclein Neighboring gene myosin light polypeptide 6-like Neighboring gene uncharacterized LOC116419314 Neighboring gene cryptochrome circadian regulator 1 Neighboring gene mitochondrial transcription termination factor 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein heterodimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: ankyrin repeat and BTB/POZ domain-containing protein BTBD11
Names
BTB domain containing 11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sarcophilus harrisii Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSarHar1.11 Primary Assembly

Genomic

  1. NC_045430.1 Reference mSarHar1.11 Primary Assembly

    Range
    18677682..18999892 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031938943.1 → XP_031794803.1  LOW QUALITY PROTEIN: ankyrin repeat and BTB/POZ domain-containing protein BTBD11

    Conserved Domains (5) summary
    smart00414
    Location:213 → 255
    H2A; Histone 2A
    sd00045
    Location:642 → 683
    ANK; ANK repeat [structural motif]
    cd18527
    Location:1058 → 1140
    BACK_BTBD11; BACK (BTB and C-terminal Kelch) domain found in BTB/POZ domain-containing protein 11 (BTBD11)
    cl38908
    Location:935 → 1065
    BTB_POZ; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain superfamily
    pfam12796
    Location:644 → 752
    Ank_2; Ankyrin repeats (3 copies)
Nucleotide Protein
Heading Accession and Version

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