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EGFL6 EGF like domain multiple 6 [ Sarcophilus harrisii (Tasmanian devil) ]

Gene ID: 100922811, updated on 8-Mar-2024

Summary

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Gene symbol
EGFL6
Gene description
EGF like domain multiple 6
See related
Ensembl:ENSSHAG00000008649
Gene type
protein coding
RefSeq status
MODEL
Organism
Sarcophilus harrisii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
12
Annotation release Status Assembly Chr Location
103 current mSarHar1.11 (GCF_902635505.1) 3 NC_045428.1 (199494554..199551737, complement)
102 previous assembly Devil_ref v7.0 (GCF_000189315.1) 3 Unlocalized Scaffold NW_003831820.1 (447137..502269, complement)

Chromosome 3 - NC_045428.1Genomic Context describing neighboring genes Neighboring gene RAB9A, member RAS oncogene family Neighboring gene transcription elongation factor A N-terminal and central domain containing Neighboring gene uncharacterized LOC116423081 Neighboring gene thymosin beta 4 X-linked

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
epidermal growth factor-like protein 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sarcophilus harrisii Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSarHar1.11 Primary Assembly

Genomic

  1. NC_045428.1 Reference mSarHar1.11 Primary Assembly

    Range
    199494554..199551737 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003765578.2 → XP_003765626.1  epidermal growth factor-like protein 6

    UniProtKB/TrEMBL
    A0A7N4V1H4, G3W3J1
    Related
    ENSSHAP00000009996.2, ENSSHAT00000010084.2
    Conserved Domains (5) summary
    cd06263
    Location:404 → 546
    MAM; Meprin, A5 protein, and protein tyrosine phosphatase Mu (MAM) domain. MAM is an extracellular domain which mediates protein-protein interactions and is found in a diverse set of proteins, many of which are known to function in cell adhesion. Members ...
    cd00054
    Location:175 → 211
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    pfam00629
    Location:404 → 548
    MAM; MAM domain, meprin/A5/mu
    pfam12947
    Location:224 → 259
    EGF_3; EGF domain
    cl00057
    Location:87 → 131
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
Nucleotide Protein
Heading Accession and Version

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