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SYTL2 synaptotagmin like 2 [ Sarcophilus harrisii (Tasmanian devil) ]

Gene ID: 100922716, updated on 8-Mar-2024

Summary

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Gene symbol
SYTL2
Gene description
synaptotagmin like 2
See related
Ensembl:ENSSHAG00000000874
Gene type
protein coding
RefSeq status
MODEL
Organism
Sarcophilus harrisii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
21
Annotation release Status Assembly Chr Location
103 current mSarHar1.11 (GCF_902635505.1) 3 NC_045428.1 (513100881..513242878, complement)
102 previous assembly Devil_ref v7.0 (GCF_000189315.1) 3 Unlocalized Scaffold NW_003831727.1 (4429..74573)

Chromosome 3 - NC_045428.1Genomic Context describing neighboring genes Neighboring gene CREB/ATF bZIP transcription factor Neighboring gene coiled-coil domain containing 89 Neighboring gene corepressor interacting with RBPJ 1-like Neighboring gene coiled-coil domain containing 83 Neighboring gene phosphatidylinositol binding clathrin assembly protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables neurexin family protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables small GTPase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in exocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in exocytic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
synaptotagmin-like protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sarcophilus harrisii Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSarHar1.11 Primary Assembly

Genomic

  1. NC_045428.1 Reference mSarHar1.11 Primary Assembly

    Range
    513100881..513242878 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031961866.1 → XP_031817726.1  synaptotagmin-like protein 2 isoform X6

    Conserved Domains (3) summary
    cd04020
    Location:1881 → 2037
    C2B_SLP_1-2-3-4; C2 domain second repeat present in Synaptotagmin-like proteins 1-4
    cd08393
    Location:1741 → 1867
    C2A_SLP-1_2; C2 domain first repeat present in Synaptotagmin-like proteins 1 and 2
    cl22851
    Location:5 → 41
    PHD_SF; PHD finger superfamily

  2. XM_031961863.1 → XP_031817723.1  synaptotagmin-like protein 2 isoform X3

    Conserved Domains (3) summary
    cd04020
    Location:1915 → 2071
    C2B_SLP_1-2-3-4; C2 domain second repeat present in Synaptotagmin-like proteins 1-4
    cd08393
    Location:1775 → 1901
    C2A_SLP-1_2; C2 domain first repeat present in Synaptotagmin-like proteins 1 and 2
    cl22851
    Location:5 → 41
    PHD_SF; PHD finger superfamily

  3. XM_031961864.1 → XP_031817724.1  synaptotagmin-like protein 2 isoform X4

    Conserved Domains (3) summary
    cd04020
    Location:1915 → 2071
    C2B_SLP_1-2-3-4; C2 domain second repeat present in Synaptotagmin-like proteins 1-4
    cd08393
    Location:1775 → 1901
    C2A_SLP-1_2; C2 domain first repeat present in Synaptotagmin-like proteins 1 and 2
    cl22851
    Location:5 → 41
    PHD_SF; PHD finger superfamily

  4. XM_031961862.1 → XP_031817722.1  synaptotagmin-like protein 2 isoform X2

    Conserved Domains (3) summary
    cd04020
    Location:1933 → 2089
    C2B_SLP_1-2-3-4; C2 domain second repeat present in Synaptotagmin-like proteins 1-4
    cd08393
    Location:1793 → 1919
    C2A_SLP-1_2; C2 domain first repeat present in Synaptotagmin-like proteins 1 and 2
    cl22851
    Location:5 → 41
    PHD_SF; PHD finger superfamily

  5. XM_031961865.1 → XP_031817725.1  synaptotagmin-like protein 2 isoform X5

    Conserved Domains (3) summary
    cd04020
    Location:1909 → 2065
    C2B_SLP_1-2-3-4; C2 domain second repeat present in Synaptotagmin-like proteins 1-4
    cd08393
    Location:1769 → 1895
    C2A_SLP-1_2; C2 domain first repeat present in Synaptotagmin-like proteins 1 and 2
    cl22851
    Location:5 → 41
    PHD_SF; PHD finger superfamily

  6. XM_031961861.1 → XP_031817721.1  synaptotagmin-like protein 2 isoform X1

    Conserved Domains (3) summary
    cd04020
    Location:1949 → 2105
    C2B_SLP_1-2-3-4; C2 domain second repeat present in Synaptotagmin-like proteins 1-4
    cd08393
    Location:1809 → 1935
    C2A_SLP-1_2; C2 domain first repeat present in Synaptotagmin-like proteins 1 and 2
    cl22851
    Location:5 → 41
    PHD_SF; PHD finger superfamily

  7. XM_031961868.1 → XP_031817728.1  synaptotagmin-like protein 2 isoform X8

    UniProtKB/TrEMBL
    A0A7N4NH73
    Related
    ENSSHAP00000023265.1, ENSSHAT00000052085.1
    Conserved Domains (3) summary
    cd04020
    Location:772 → 928
    C2B_SLP_1-2-3-4; C2 domain second repeat present in Synaptotagmin-like proteins 1-4
    cd08393
    Location:632 → 758
    C2A_SLP-1_2; C2 domain first repeat present in Synaptotagmin-like proteins 1 and 2
    cl22851
    Location:5 → 41
    PHD_SF; PHD finger superfamily

  8. XM_031961869.1 → XP_031817729.1  synaptotagmin-like protein 2 isoform X9

    UniProtKB/TrEMBL
    A0A7N4PIX7, A0A7N4V246
    Related
    ENSSHAP00000038263.1, ENSSHAT00000029370.1
    Conserved Domains (3) summary
    cd04020
    Location:748 → 904
    C2B_SLP_1-2-3-4; C2 domain second repeat present in Synaptotagmin-like proteins 1-4
    cd08393
    Location:608 → 734
    C2A_SLP-1_2; C2 domain first repeat present in Synaptotagmin-like proteins 1 and 2
    cl22851
    Location:5 → 41
    PHD_SF; PHD finger superfamily

  9. XM_031961867.1 → XP_031817727.1  synaptotagmin-like protein 2 isoform X7

    UniProtKB/TrEMBL
    A0A7N4NH73, G3VCS2
    Related
    ENSSHAP00000000976.2, ENSSHAT00000000989.2
    Conserved Domains (3) summary
    cd04020
    Location:788 → 944
    C2B_SLP_1-2-3-4; C2 domain second repeat present in Synaptotagmin-like proteins 1-4
    cd08393
    Location:648 → 774
    C2A_SLP-1_2; C2 domain first repeat present in Synaptotagmin-like proteins 1 and 2
    cl22851
    Location:5 → 41
    PHD_SF; PHD finger superfamily

  10. XM_031961870.1 → XP_031817730.1  synaptotagmin-like protein 2 isoform X10

    Conserved Domains (3) summary
    cd04020
    Location:495 → 651
    C2B_SLP_1-2-3-4; C2 domain second repeat present in Synaptotagmin-like proteins 1-4
    cd08393
    Location:355 → 481
    C2A_SLP-1_2; C2 domain first repeat present in Synaptotagmin-like proteins 1 and 2
    cl22851
    Location:5 → 41
    PHD_SF; PHD finger superfamily

  11. XM_031961871.1 → XP_031817731.1  synaptotagmin-like protein 2 isoform X11

    UniProtKB/TrEMBL
    A0A7N4PAF6
    Conserved Domains (2) summary
    cd04020
    Location:234 → 390
    C2B_SLP_1-2-3-4; C2 domain second repeat present in Synaptotagmin-like proteins 1-4
    cd08393
    Location:94 → 220
    C2A_SLP-1_2; C2 domain first repeat present in Synaptotagmin-like proteins 1 and 2

  12. XM_031961873.1 → XP_031817733.1  synaptotagmin-like protein 2 isoform X12

    UniProtKB/TrEMBL
    A0A7N4PAF6, A0A7N4UZH4
    Related
    ENSSHAP00000028026.1, ENSSHAT00000031438.1
    Conserved Domains (2) summary
    cd04020
    Location:211 → 367
    C2B_SLP_1-2-3-4; C2 domain second repeat present in Synaptotagmin-like proteins 1-4
    cd08393
    Location:71 → 197
    C2A_SLP-1_2; C2 domain first repeat present in Synaptotagmin-like proteins 1 and 2
Nucleotide Protein
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