U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SMG9 SMG9 nonsense mediated mRNA decay factor [ Sarcophilus harrisii (Tasmanian devil) ]

Gene ID: 100918802, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
SMG9
Gene description
SMG9 nonsense mediated mRNA decay factor
See related
Ensembl:ENSSHAG00000003151
Gene type
protein coding
RefSeq status
MODEL
Organism
Sarcophilus harrisii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 3
Exon count:
17
Annotation release Status Assembly Chr Location
103 current mSarHar1.11 (GCF_902635505.1) 3 NC_045428.1 (595439001..595448412, complement)
102 previous assembly Devil_ref v7.0 (GCF_000189315.1) 3 Unlocalized Scaffold NW_003832656.1 (49475..60409)

Chromosome 3 - NC_045428.1Genomic Context describing neighboring genes Neighboring gene interferon-inducible GTPase 5 Neighboring gene interferon-inducible GTPase 5 Neighboring gene potassium calcium-activated channel subfamily N member 4 Neighboring gene uncharacterized LOC116422902 Neighboring gene LY6/PLAUR domain containing 5

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
protein SMG9
Names
smg-9 homolog, nonsense mediated mRNA decay factor

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Sarcophilus harrisii Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSarHar1.11 Primary Assembly

Genomic

  1. NC_045428.1 Reference mSarHar1.11 Primary Assembly

    Range
    595439001..595448412 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031963275.1 → XP_031819135.1  protein SMG9

    UniProtKB/TrEMBL
    A0A7N4UXY3
    Related
    ENSSHAP00000024725.1, ENSSHAT00000030991.1

  2. XM_031963276.1 → XP_031819136.1  protein SMG9

    UniProtKB/TrEMBL
    A0A7N4UXY3

  3. XM_031963278.1 → XP_031819138.1  protein SMG9

    UniProtKB/TrEMBL
    A0A7N4UXY3

  4. XM_031963279.1 → XP_031819139.1  protein SMG9

    UniProtKB/TrEMBL
    A0A7N4UXY3

  5. XM_031963277.1 → XP_031819137.1  protein SMG9

    UniProtKB/TrEMBL
    A0A7N4UXY3
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.