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SH3YL1 SH3 and SYLF domain containing 1 [ Sarcophilus harrisii (Tasmanian devil) ]

Gene ID: 100915818, updated on 8-Mar-2024

Summary

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Gene symbol
SH3YL1
Gene description
SH3 and SYLF domain containing 1
See related
Ensembl:ENSSHAG00000005860
Gene type
protein coding
RefSeq status
MODEL
Organism
Sarcophilus harrisii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus
Orthologs
human mouse all
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Genomic context

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See SH3YL1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
11
Annotation release Status Assembly Chr Location
103 current mSarHar1.11 (GCF_902635505.1) 2 NC_045427.1 (180141125..180193272, complement)
102 previous assembly Devil_ref v7.0 (GCF_000189315.1) 1 Unlocalized Scaffold NW_003816706.1 (185600..237676)

Chromosome 2 - NC_045427.1Genomic Context describing neighboring genes Neighboring gene beta-Ala-His dipeptidase pseudogene Neighboring gene uncharacterized LOC116421107 Neighboring gene poly(U)-binding-splicing factor PUF60 pseudogene Neighboring gene acid phosphatase 1 Neighboring gene ALK and LTK ligand 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in ruffle membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
SH3 domain-containing YSC84-like protein 1
Names
SH3 domain containing, Ysc84-like 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sarcophilus harrisii Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSarHar1.11 Primary Assembly

Genomic

  1. NC_045427.1 Reference mSarHar1.11 Primary Assembly

    Range
    180141125..180193272 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012539908.3 → XP_012395362.1  SH3 domain-containing YSC84-like protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A7N4NZQ9, A0A7N4PIY5
    Related
    ENSSHAP00000030910.1, ENSSHAT00000029418.1
    Conserved Domains (2) summary
    cd11525
    Location:17 → 215
    SYLF_SH3YL1_like; The SYLF domain (also called DUF500), a novel lipid-binding module, of SH3 domain containing Ysc84-like 1 (SH3YL1) and similar proteins
    cd11841
    Location:291 → 344
    SH3_SH3YL1_like; Src homology 3 domain of SH3 domain containing Ysc84-like 1 (SH3YL1) protein

  2. XM_012539909.3 → XP_012395363.1  SH3 domain-containing YSC84-like protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A7N4PIY5, G3VU84
    Related
    ENSSHAP00000006739.2, ENSSHAT00000006798.2
    Conserved Domains (2) summary
    cd11525
    Location:11 → 209
    SYLF_SH3YL1_like; The SYLF domain (also called DUF500), a novel lipid-binding module, of SH3 domain containing Ysc84-like 1 (SH3YL1) and similar proteins
    cd11841
    Location:285 → 338
    SH3_SH3YL1_like; Src homology 3 domain of SH3 domain containing Ysc84-like 1 (SH3YL1) protein
Nucleotide Protein
Heading Accession and Version

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