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ORMDL3 ORMDL sphingolipid biosynthesis regulator 3 [ Sarcophilus harrisii (Tasmanian devil) ]

Gene ID: 100914206, updated on 19-Jun-2024

Summary

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Gene symbol
ORMDL3
Gene description
ORMDL sphingolipid biosynthesis regulator 3
See related
Ensembl:ENSSHAG00000025465
Gene type
protein coding
RefSeq status
MODEL
Organism
Sarcophilus harrisii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
8
Annotation release Status Assembly Chr Location
103 current mSarHar1.11 (GCF_902635505.1) 4 NC_045429.1 (334959227..334969843, complement)
102 previous assembly Devil_ref v7.0 (GCF_000189315.1) 4 Unlocalized Scaffold NW_003838837.1 (1455406..1466138)

Chromosome 4 - NC_045429.1Genomic Context describing neighboring genes Neighboring gene zona pellucida binding protein 2 Neighboring gene gasdermin B Neighboring gene gasdermin-A-like Neighboring gene leucine rich repeat containing 3C

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in ceramide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular sphingolipid homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of ceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ORM1-like protein 3
Names
ORM1-like 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sarcophilus harrisii Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSarHar1.11 Primary Assembly

Genomic

  1. NC_045429.1 Reference mSarHar1.11 Primary Assembly

    Range
    334959227..334969843 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012548349.3 → XP_012403803.1  ORM1-like protein 3 isoform X1

    See identical proteins and their annotated locations for XP_012403803.1

    UniProtKB/TrEMBL
    A0A7N4PFI6, A0A7N4PS52
    Related
    ENSSHAP00000041513.1, ENSSHAT00000028186.1
    Conserved Domains (1) summary
    pfam04061
    Location:20 → 155
    ORMDL; ORMDL family

  2. XM_031966201.1 → XP_031822061.1  ORM1-like protein 3 isoform X2

    UniProtKB/TrEMBL
    A0A7N4PFI6
    Conserved Domains (1) summary
    pfam04061
    Location:11 → 146
    ORMDL; ORMDL family

  3. XM_031966202.1 → XP_031822062.1  ORM1-like protein 3 isoform X2

    UniProtKB/TrEMBL
    A0A7N4PFI6
    Related
    ENSSHAP00000036928.1, ENSSHAT00000035017.1
    Conserved Domains (1) summary
    pfam04061
    Location:11 → 146
    ORMDL; ORMDL family

  4. XM_012548353.3 → XP_012403807.1  ORM1-like protein 3 isoform X2

    See identical proteins and their annotated locations for XP_012403807.1

    UniProtKB/TrEMBL
    A0A7N4PFI6
    Conserved Domains (1) summary
    pfam04061
    Location:11 → 146
    ORMDL; ORMDL family

  5. XM_031966203.1 → XP_031822063.1  ORM1-like protein 3 isoform X2

    UniProtKB/TrEMBL
    A0A7N4PFI6
    Conserved Domains (1) summary
    pfam04061
    Location:11 → 146
    ORMDL; ORMDL family
Nucleotide Protein
Heading Accession and Version

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