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STX2 syntaxin 2 [ Sarcophilus harrisii (Tasmanian devil) ]

Gene ID: 100914181, updated on 8-Mar-2024

Summary

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Gene symbol
STX2
Gene description
syntaxin 2
See related
Ensembl:ENSSHAG00000027891
Gene type
protein coding
RefSeq status
MODEL
Organism
Sarcophilus harrisii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
12
Annotation release Status Assembly Chr Location
103 current mSarHar1.11 (GCF_902635505.1) 1 NC_045426.1 (677780111..677831409)
102 previous assembly Devil_ref v7.0 (GCF_000189315.1) 2 Unlocalized Scaffold NW_003823442.1 (1471242..1503006)

Chromosome 1 - NC_045426.1Genomic Context describing neighboring genes Neighboring gene adhesion G protein-coupled receptor D1 Neighboring gene RAN, member RAS oncogene family Neighboring gene RIMS binding protein 2 Neighboring gene piwi-like protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables SNAP receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables SNARE binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in exocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synaptic vesicle fusion to presynaptic active zone membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle docking IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SNARE complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in presynaptic active zone membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synaptic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
syntaxin-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sarcophilus harrisii Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSarHar1.11 Primary Assembly

Genomic

  1. NC_045426.1 Reference mSarHar1.11 Primary Assembly

    Range
    677780111..677831409
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031948395.1 → XP_031804255.1  syntaxin-2 isoform X2

    UniProtKB/TrEMBL
    A0A7N4PH57, A0A7N4UYZ9
    Related
    ENSSHAP00000037478.1, ENSSHAT00000051253.1
    Conserved Domains (2) summary
    pfam00804
    Location:29 → 226
    Syntaxin
    pfam05739
    Location:227 → 278
    SNARE; SNARE domain

  2. XM_031948396.1 → XP_031804256.1  syntaxin-2 isoform X3

    UniProtKB/TrEMBL
    A0A7N4Q0L2
    Related
    ENSSHAP00000045295.1, ENSSHAT00000025835.1
    Conserved Domains (1) summary
    pfam00804
    Location:29 → 225
    Syntaxin

  3. XM_031948394.1 → XP_031804254.1  syntaxin-2 isoform X1

    UniProtKB/TrEMBL
    A0A7N4NLE0, A0A7N4UYZ9
    Related
    ENSSHAP00000024918.1, ENSSHAT00000044503.1
    Conserved Domains (2) summary
    pfam00804
    Location:29 → 226
    Syntaxin
    cl22856
    Location:194 → 260
    SNARE; SNARE motif

  4. XM_031948397.1 → XP_031804257.1  syntaxin-2 isoform X4

    Conserved Domains (1) summary
    pfam00804
    Location:29 → 225
    Syntaxin
Nucleotide Protein
Heading Accession and Version

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