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LOC100839702 glycylpeptide N-tetradecanoyltransferase 1 [ Brachypodium distachyon (stiff brome) ]

Gene ID: 100839702, updated on 9-Nov-2023

Summary

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Gene symbol
LOC100839702
Gene description
glycylpeptide N-tetradecanoyltransferase 1
Locus tag
BRADI_2g47820v3
Gene type
protein coding
RefSeq status
MODEL
Organism
Brachypodium distachyon
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Stipodae; Brachypodieae; Brachypodium
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Genomic context

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Location:
chromosome: 2
Exon count:
7
Annotation release Status Assembly Chr Location
103 current Brachypodium_distachyon_v3.0 (GCF_000005505.3) 2 NC_016132.3 (47971630..47980244)
102 previous assembly Brachypodium_distachyon_v2.0 (GCF_000005505.2) 2 NC_016132.2 (48226047..48232215)

Chromosome 2 - NC_016132.3Genomic Context describing neighboring genes Neighboring gene vesicle transport v-SNARE 13 Neighboring gene uncharacterized LOC100822019 Neighboring gene probable magnesium transporter NIPA9 Neighboring gene uncharacterized LOC112270894 Neighboring gene casein kinase 1-like protein 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glycylpeptide N-tetradecanoyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-terminal peptidyl-glycine N-myristoylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nucleosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of nucleosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycylpeptide N-tetradecanoyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brachypodium distachyon Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Brachypodium_distachyon_v3.0 Primary Assembly

Genomic

  1. NC_016132.3 Reference Brachypodium_distachyon_v3.0 Primary Assembly

    Range
    47971630..47980244
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003569603.4 → XP_003569651.2  glycylpeptide N-tetradecanoyltransferase 1

    Conserved Domains (3) summary
    smart00526
    Location:113 → 175
    H15; Domain in histone families 1 and 5
    cd11660
    Location:6 → 56
    SANT_TRF; Telomere repeat binding factor-like DNA-binding domains of the SANT/myb-like family
    cl27359
    Location:369 → 771
    NMT_C; Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain
Nucleotide Protein Strain
Heading Accession and Version

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