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LOC100833769 zinc finger protein 36 [ Brachypodium distachyon (stiff brome) ]

Gene ID: 100833769, updated on 9-Nov-2023

Summary

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Gene symbol
LOC100833769
Gene description
zinc finger protein 36
Locus tag
BRADI_1g16010v3
Gene type
protein coding
RefSeq status
MODEL
Organism
Brachypodium distachyon
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Stipodae; Brachypodieae; Brachypodium
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Genomic context

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Location:
chromosome: 1
Exon count:
1
Annotation release Status Assembly Chr Location
103 current Brachypodium_distachyon_v3.0 (GCF_000005505.3) 1 NC_016131.3 (12943223..12944118)
102 previous assembly Brachypodium_distachyon_v2.0 (GCF_000005505.2) 1 NC_016131.2 (12943209..12944061)

Chromosome 1 - NC_016131.3Genomic Context describing neighboring genes Neighboring gene arabinosyltransferase RRA3 Neighboring gene 3-oxo-Delta(4,5)-steroid 5-beta-reductase Neighboring gene uncharacterized LOC100831184 Neighboring gene transmembrane protein 230

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Large-scale collection and analysis of full-length cDNAs from Brachypodium distachyon and integration with Pooideae sequence resources. Mochida K, et al. PLoS One, 2013. PMID 24130698, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 36

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brachypodium distachyon Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Brachypodium_distachyon_v3.0 Primary Assembly

Genomic

  1. NC_016131.3 Reference Brachypodium_distachyon_v3.0 Primary Assembly

    Range
    12943223..12944118
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003562330.3 → XP_003562378.1  zinc finger protein 36

    UniProtKB/TrEMBL
    I1GQQ9
    Conserved Domains (2) summary
    sd00017
    Location:61 → 81
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13912
    Location:109 → 132
    zf-C2H2_6; C2H2-type zinc finger
Nucleotide Protein Strain
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