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LOC100830770 asparagine synthetase [glutamine-hydrolyzing] 1 [ Brachypodium distachyon (stiff brome) ]

Gene ID: 100830770, updated on 9-Nov-2023

Summary

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Gene symbol
LOC100830770
Gene description
asparagine synthetase [glutamine-hydrolyzing] 1
Locus tag
BRADI_1g65540v3
Gene type
protein coding
RefSeq status
MODEL
Organism
Brachypodium distachyon
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Stipodae; Brachypodieae; Brachypodium
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Genomic context

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Location:
chromosome: 1
Exon count:
13
Annotation release Status Assembly Chr Location
103 current Brachypodium_distachyon_v3.0 (GCF_000005505.3) 1 NC_016131.3 (64751030..64754937)
102 previous assembly Brachypodium_distachyon_v2.0 (GCF_000005505.2) 1 NC_016131.2 (64806062..64809943)

Chromosome 1 - NC_016131.3Genomic Context describing neighboring genes Neighboring gene probable protein phosphatase 2C 32 Neighboring gene protein trichome birefringence-like 28 Neighboring gene protein PMR5 Neighboring gene uncharacterized LOC100841702

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Large-scale collection and analysis of full-length cDNAs from Brachypodium distachyon and integration with Pooideae sequence resources. Mochida K, et al. PLoS One, 2013. PMID 24130698, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables asparagine synthase (glutamine-hydrolyzing) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in asparagine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
asparagine synthetase [glutamine-hydrolyzing] 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brachypodium distachyon Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Brachypodium_distachyon_v3.0 Primary Assembly

Genomic

  1. NC_016131.3 Reference Brachypodium_distachyon_v3.0 Primary Assembly

    Range
    64751030..64754937
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003558107.4 → XP_003558155.1  asparagine synthetase [glutamine-hydrolyzing] 1

    UniProtKB/TrEMBL
    I1H6K4
    Conserved Domains (3) summary
    PLN02549
    Location:1 → 573
    PLN02549; asparagine synthase (glutamine-hydrolyzing)
    cd00712
    Location:2 → 193
    AsnB; Glutamine amidotransferases class-II (GATase) asparagine synthase_B type. Asparagine synthetase B catalyses the ATP-dependent conversion of aspartate to asparagine. This enzyme is a homodimer, with each monomer composed of a glutaminase domain and a ...
    pfam00733
    Location:211 → 512
    Asn_synthase; Asparagine synthase
Nucleotide Protein Strain
Heading Accession and Version

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