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LOC100812495 zinc finger protein JACKDAW [ Glycine max (soybean) ]

Gene ID: 100812495, updated on 7-Dec-2023

Summary

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Gene symbol
LOC100812495
Gene description
zinc finger protein JACKDAW
Locus tag
GLYMA_03G179700v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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Location:
chromosome: 3
Exon count:
3
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 3 NC_016090.4 (40364771..40367709)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 3 NC_016090.3 (39192497..39195596)

Chromosome 3 - NC_016090.4Genomic Context describing neighboring genes Neighboring gene syntaxin-71-like Neighboring gene NAC domain-containing protein 2-like Neighboring gene dnaJ protein P58IPK homolog Neighboring gene fasciclin-like arabinogalactan protein 11

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein JACKDAW

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_016090.4 Reference Glycine_max_v4.0 Primary Assembly

    Range
    40364771..40367709
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041014123.1 → XP_040870057.1  zinc finger protein JACKDAW

    UniProtKB/TrEMBL
    I1JPL1
    Conserved Domains (1) summary
    sd00017
    Location:69 → 89
    ZF_C2H2; C2H2 Zn finger [structural motif]

  2. XM_014773874.3 → XP_014629360.1  zinc finger protein JACKDAW

    UniProtKB/TrEMBL
    I1JPL1
    Conserved Domains (1) summary
    sd00017
    Location:69 → 89
    ZF_C2H2; C2H2 Zn finger [structural motif]
Nucleotide Protein
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Gene LinkOut

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Other Literature Sources
Molecular Biology Databases