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LOC100811208 homeobox-leucine zipper protein ATHB-12 [ Glycine max (soybean) ]

Gene ID: 100811208, updated on 7-Dec-2023

Summary

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Gene symbol
LOC100811208
Gene description
homeobox-leucine zipper protein ATHB-12
Locus tag
GLYMA_16G021000v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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Location:
chromosome: 16
Exon count:
2
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 16 NC_038252.2 (1953775..1955358)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 16 NC_038252.1 (1965331..1966493)

Chromosome 16 - NC_038252.2Genomic Context describing neighboring genes Neighboring gene auxin-induced protein 15A-like Neighboring gene uncharacterized LOC121173762 Neighboring gene microRNA MIR166a Neighboring gene cytochrome P450 78A3-like Neighboring gene cytochrome b5-like heme/steroid binding domain-containing protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
homeobox-leucine zipper protein ATHB-12
Names
homeodomain/HOMEOBOX transcription factor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038252.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    1953775..1955358
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003548159.5 → XP_003548207.2  homeobox-leucine zipper protein ATHB-12

    UniProtKB/TrEMBL
    A0A0K2CTR1, I1MKF3
    Conserved Domains (2) summary
    pfam00046
    Location:39 → 89
    Homeobox; Homeobox domain
    pfam02183
    Location:91 → 133
    HALZ; Homeobox associated leucine zipper
Nucleotide Protein
Heading Accession and Version

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