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LOC100806151 E2F transcription factor-like E2FE [ Glycine max (soybean) ]

Gene ID: 100806151, updated on 7-Dec-2023

Summary

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Gene symbol
LOC100806151
Gene description
E2F transcription factor-like E2FE
Locus tag
GLYMA_05G033400v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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Location:
chromosome: 5
Exon count:
12
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 5 NC_038241.2 (2904799..2908435)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 5 NC_038241.1 (2899145..2907406)

Chromosome 5 - NC_038241.2Genomic Context describing neighboring genes Neighboring gene splicing regulatory glutamine/lysine-rich protein 1-like Neighboring gene uncharacterized LOC121174945 Neighboring gene betaine aldehyde dehydrogenase Neighboring gene uncharacterized LOC100813287

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of RNA polymerase II transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E2F transcription factor-like E2FE

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038241.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    2904799..2908435
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003525109.5 → XP_003525157.1  E2F transcription factor-like E2FE

    UniProtKB/TrEMBL
    K7KMM8, K7KMM9
    Conserved Domains (1) summary
    pfam02319
    Location:18 → 81
    E2F_TDP; E2F/DP family winged-helix DNA-binding domain

RNA

  1. XR_414175.3 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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