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Ddx6 DEAD-box helicase 6 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100759836, updated on 8-Mar-2024

Summary

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Gene symbol
Ddx6
Gene description
DEAD-box helicase 6
See related
Ensembl:ENSCGRG00015015596
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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See Ddx6 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
14
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614897.1 (339832..371091, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 4 NC_048597.1 (156291765..156322747)

NW_003614897.1Genomic Context describing neighboring genes Neighboring gene pleckstrin homology like domain family B member 1 Neighboring gene trehalase Neighboring gene uncharacterized LOC118240026 Neighboring gene GRB2-associated-binding protein 2-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in P-body assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in stress granule assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in P-body IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasmic stress granule IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable ATP-dependent RNA helicase DDX6
Names
DEAD (Asp-Glu-Ala-Asp) box helicase 6
putative ATP-dependent RNA helicase DDX6
putative ATP-dependent RNA helicase DDX6-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614897.1 Reference CriGri_1.0 Primary Assembly

    Range
    339832..371091 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007651150.4 → XP_007649340.1  probable ATP-dependent RNA helicase DDX6

    See identical proteins and their annotated locations for XP_007649340.1

    UniProtKB/TrEMBL
    G3I5T3
    Conserved Domains (2) summary
    cd18787
    Location:309 → 438
    SF2_C_DEAD; C-terminal helicase domain of the DEAD box helicases
    cd17940
    Location:98 → 299
    DEADc_DDX6; DEAD-box helicase domain of DEAD box protein 6

  2. XM_003510518.5 → XP_003510566.1  probable ATP-dependent RNA helicase DDX6

    See identical proteins and their annotated locations for XP_003510566.1

    UniProtKB/TrEMBL
    G3I5T3
    Conserved Domains (2) summary
    cd18787
    Location:309 → 438
    SF2_C_DEAD; C-terminal helicase domain of the DEAD box helicases
    cd17940
    Location:98 → 299
    DEADc_DDX6; DEAD-box helicase domain of DEAD box protein 6

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048597.1 Alternate CriGri-PICRH-1.0

    Range
    156291765..156322747
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027411961.2 → XP_027267762.1  probable ATP-dependent RNA helicase DDX6

    UniProtKB/TrEMBL
    G3I5T3
    Related
    ENSCGRP00015020396.1, ENSCGRT00015025098.2
    Conserved Domains (2) summary
    cd18787
    Location:309 → 438
    SF2_C_DEAD; C-terminal helicase domain of the DEAD box helicases
    cd17940
    Location:98 → 299
    DEADc_DDX6; DEAD-box helicase domain of DEAD box protein 6

  2. XM_027411956.2 → XP_027267757.1  probable ATP-dependent RNA helicase DDX6

    UniProtKB/TrEMBL
    G3I5T3
    Conserved Domains (2) summary
    cd18787
    Location:309 → 438
    SF2_C_DEAD; C-terminal helicase domain of the DEAD box helicases
    cd17940
    Location:98 → 299
    DEADc_DDX6; DEAD-box helicase domain of DEAD box protein 6

  3. XM_027411959.2 → XP_027267760.1  probable ATP-dependent RNA helicase DDX6

    UniProtKB/TrEMBL
    G3I5T3
    Conserved Domains (2) summary
    cd18787
    Location:309 → 438
    SF2_C_DEAD; C-terminal helicase domain of the DEAD box helicases
    cd17940
    Location:98 → 299
    DEADc_DDX6; DEAD-box helicase domain of DEAD box protein 6

  4. XM_027411960.2 → XP_027267761.1  probable ATP-dependent RNA helicase DDX6

    UniProtKB/TrEMBL
    G3I5T3
    Conserved Domains (2) summary
    cd18787
    Location:309 → 438
    SF2_C_DEAD; C-terminal helicase domain of the DEAD box helicases
    cd17940
    Location:98 → 299
    DEADc_DDX6; DEAD-box helicase domain of DEAD box protein 6

  5. XM_027411958.2 → XP_027267759.1  probable ATP-dependent RNA helicase DDX6

    UniProtKB/TrEMBL
    G3I5T3
    Conserved Domains (2) summary
    cd18787
    Location:309 → 438
    SF2_C_DEAD; C-terminal helicase domain of the DEAD box helicases
    cd17940
    Location:98 → 299
    DEADc_DDX6; DEAD-box helicase domain of DEAD box protein 6

  6. XM_027411957.2 → XP_027267758.1  probable ATP-dependent RNA helicase DDX6

    UniProtKB/TrEMBL
    G3I5T3
    Conserved Domains (2) summary
    cd18787
    Location:309 → 438
    SF2_C_DEAD; C-terminal helicase domain of the DEAD box helicases
    cd17940
    Location:98 → 299
    DEADc_DDX6; DEAD-box helicase domain of DEAD box protein 6
Nucleotide Protein Strain
Heading Accession and Version

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