U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Ablim3 actin binding LIM protein family member 3 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100759449, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
Ablim3
Gene description
actin binding LIM protein family member 3
Locus tag
I79_016594
See related
Ensembl:ENSCGRG00015020247
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 2
Exon count:
21
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614565.1 (346320..449959, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 2 NC_048595.1 (177200696..177305605)

NW_003614565.1Genomic Context describing neighboring genes Neighboring gene GrpE like 2, mitochondrial Neighboring gene actin filament associated protein 1 like 1 Neighboring gene SH3 domain and tetratricopeptide repeats 2

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lamellipodium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in stress fiber IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
actin-binding LIM protein 3

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614565.1 Reference CriGri_1.0 Primary Assembly

    Range
    346320..449959 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035459957.1 → XP_035315848.1  actin-binding LIM protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A8C2MTC2
    Conserved Domains (6) summary
    smart00153
    Location:631 → 666
    VHP; Villin headpiece domain
    cd09327
    Location:39 → 90
    LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
    cd09328
    Location:95 → 148
    LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
    cd09329
    Location:167 → 218
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:226 → 281
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
    pfam16182
    Location:289 → 630
    AbLIM_anchor; Putative adherens-junction anchoring region of AbLIM

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048595.1 Alternate CriGri-PICRH-1.0

    Range
    177200696..177305605
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035438720.1 → XP_035294611.1  actin-binding LIM protein 3 isoform X2

    UniProtKB/TrEMBL
    A0A8C2MTC2, A0A9J7K0F1
    Related
    ENSCGRP00015026816.1, ENSCGRT00015032842.2
    Conserved Domains (6) summary
    smart00153
    Location:664 → 699
    VHP; Villin headpiece domain
    cd09327
    Location:39 → 90
    LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
    cd09328
    Location:95 → 150
    LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
    cd09329
    Location:167 → 218
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:226 → 281
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
    pfam16182
    Location:289 → 663
    AbLIM_anchor; Putative adherens-junction anchoring region of AbLIM
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.