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Cars1 cysteinyl-tRNA synthetase 1 [ Cavia porcellus (domestic guinea pig) ]

Gene ID: 100733121, updated on 8-Mar-2024

Summary

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Gene symbol
Cars1
Gene description
cysteinyl-tRNA synthetase 1
See related
Ensembl:ENSCPOG00000005087
Gene type
protein coding
RefSeq status
MODEL
Organism
Cavia porcellus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
Also known as
Cars
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
24
Annotation release Status Assembly Chr Location
RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947500.1 (29730948..29785254)
103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176377.1 (11586340..11643782)

NW_026947500.1Genomic Context describing neighboring genes Neighboring gene tumor necrosis factor receptor superfamily member 26-like Neighboring gene tumor necrosis factor receptor superfamily member 26-like Neighboring gene uncharacterized LOC134470921 Neighboring gene small nucleolar RNA SNORA2/SNORA34 family Neighboring gene nucleosome assembly protein 1 like 4 Neighboring gene pleckstrin homology like domain family A member 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cysteine-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cysteinyl-tRNA aminoacylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cysteine--tRNA ligase, cytoplasmic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCavPor4.1

Genomic

  1. NW_026947500.1 Reference mCavPor4.1

    Range
    29730948..29785254
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005003037.4 → XP_005003094.1  cysteine--tRNA ligase, cytoplasmic isoform X2

    UniProtKB/TrEMBL
    A0A286Y1W4
    Related
    ENSCPOP00000031693.1
    Conserved Domains (2) summary
    cd00672
    Location:30 → 445
    CysRS_core; catalytic core domain of cysteinyl tRNA synthetase
    PTZ00399
    Location:1 → 739
    PTZ00399; cysteinyl-tRNA-synthetase; Provisional

  2. XM_003468335.5 → XP_003468383.1  cysteine--tRNA ligase, cytoplasmic isoform X1

    UniProtKB/TrEMBL
    H0V4M6
    Related
    ENSCPOP00000004575.3
    Conserved Domains (3) summary
    cd00672
    Location:113 → 528
    CysRS_core; catalytic core domain of cysteinyl tRNA synthetase
    cd10310
    Location:4 → 76
    GST_C_CysRS_N; Glutathione S-transferase C-terminal-like, alpha helical domain of Cysteinyl-tRNA synthetase from higher eukaryotes
    PTZ00399
    Location:91 → 822
    PTZ00399; cysteinyl-tRNA-synthetase; Provisional

  3. XM_063227716.1 → XP_063083786.1  cysteine--tRNA ligase, cytoplasmic isoform X3

  4. XM_063227717.1 → XP_063083787.1  cysteine--tRNA ligase, cytoplasmic isoform X4

Nucleotide Protein
Heading Accession and Version

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