U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Zbtb48 zinc finger and BTB domain containing 48 [ Cavia porcellus (domestic guinea pig) ]

Gene ID: 100724022, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
Zbtb48
Gene description
zinc finger and BTB domain containing 48
See related
Ensembl:ENSCPOG00000009998
Gene type
protein coding
RefSeq status
MODEL
Organism
Cavia porcellus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947508.1 (3522890..3529558)
103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176394.1 (26113712..26120359, complement)

NW_026947508.1Genomic Context describing neighboring genes Neighboring gene nucleolar protein 9 Neighboring gene taste 1 receptor member 1 Neighboring gene kelch like family member 21 Neighboring gene PHD finger protein 13 Neighboring gene THAP domain containing 3

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
telomere zinc finger-associated protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCavPor4.1

Genomic

  1. NW_026947508.1 Reference mCavPor4.1

    Range
    3522890..3529558
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063235410.1 → XP_063091480.1  telomere zinc finger-associated protein isoform X1

  2. XM_063235409.1 → XP_063091479.1  telomere zinc finger-associated protein isoform X1

  3. XM_003471454.5 → XP_003471502.1  telomere zinc finger-associated protein isoform X2

    See identical proteins and their annotated locations for XP_003471502.1

    UniProtKB/TrEMBL
    H0VFW1
    Related
    ENSCPOP00000008973.2
    Conserved Domains (7) summary
    smart00225
    Location:27 → 114
    BTB; Broad-Complex, Tramtrack and Bric a brac
    COG5048
    Location:463 → 524
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:467 → 487
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:409 → 425
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:578 → 600
    zf-C2H2; Zinc finger, C2H2 type
    pfam00651
    Location:16 → 114
    BTB; BTB/POZ domain
    pfam13465
    Location:479 → 504
    zf-H2C2_2; Zinc-finger double domain

  4. XM_063235411.1 → XP_063091481.1  telomere zinc finger-associated protein isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.