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Deaf1 DEAF1 transcription factor [ Cavia porcellus (domestic guinea pig) ]

Gene ID: 100718625, updated on 6-Jun-2024

Summary

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Gene symbol
Deaf1
Gene description
DEAF1 transcription factor
See related
Ensembl:ENSCPOG00000006073
Gene type
protein coding
RefSeq status
MODEL
Organism
Cavia porcellus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947489.1 (105230927..105253041)
103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176201.1 (231790..253652)

NW_026947489.1Genomic Context describing neighboring genes Neighboring gene EPS8 signaling adaptor L2 Neighboring gene transmembrane protein 80 Neighboring gene dopamine receptor D4 Neighboring gene secretin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
deformed epidermal autoregulatory factor 1 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCavPor4.1

Genomic

  1. NW_026947489.1 Reference mCavPor4.1

    Range
    105230927..105253041
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004999522.4 → XP_004999579.2  deformed epidermal autoregulatory factor 1 homolog isoform X1

    UniProtKB/TrEMBL
    H0V6Y8

  2. XM_003461312.5 → XP_003461360.2  deformed epidermal autoregulatory factor 1 homolog isoform X2

    UniProtKB/TrEMBL
    H0V6Y8

  3. XM_004999526.4 → XP_004999583.2  deformed epidermal autoregulatory factor 1 homolog isoform X8

    UniProtKB/TrEMBL
    H0V6Y8

  4. XM_004999527.4 → XP_004999584.2  deformed epidermal autoregulatory factor 1 homolog isoform X9

    UniProtKB/TrEMBL
    H0V6Y8

  5. XM_063251980.1 → XP_063108050.1  deformed epidermal autoregulatory factor 1 homolog isoform X11

    UniProtKB/TrEMBL
    H0V6Y8

  6. XM_004999525.4 → XP_004999582.2  deformed epidermal autoregulatory factor 1 homolog isoform X4

    UniProtKB/TrEMBL
    H0V6Y8

  7. XM_063251976.1 → XP_063108046.1  deformed epidermal autoregulatory factor 1 homolog isoform X5

    UniProtKB/TrEMBL
    H0V6Y8

  8. XM_063251978.1 → XP_063108048.1  deformed epidermal autoregulatory factor 1 homolog isoform X7

    UniProtKB/TrEMBL
    H0V6Y8

  9. XM_063251979.1 → XP_063108049.1  deformed epidermal autoregulatory factor 1 homolog isoform X10

    UniProtKB/TrEMBL
    H0V6Y8

  10. XM_004999523.4 → XP_004999580.2  deformed epidermal autoregulatory factor 1 homolog isoform X3

    UniProtKB/TrEMBL
    H0V6Y8

  11. XM_063251977.1 → XP_063108047.1  deformed epidermal autoregulatory factor 1 homolog isoform X6

    UniProtKB/TrEMBL
    H0V6Y8
Nucleotide Protein
Heading Accession and Version

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