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Neurod1 neuronal differentiation 1 [ Cavia porcellus (domestic guinea pig) ]

Gene ID: 100717228, updated on 8-Mar-2024

Summary

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Gene symbol
Neurod1
Gene description
neuronal differentiation 1
See related
Ensembl:ENSCPOG00000025248
Gene type
protein coding
RefSeq status
MODEL
Organism
Cavia porcellus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
Orthologs
human mouse all
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Genomic context

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See Neurod1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947495.1 (68398879..68403058, complement)
103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176416.1 (9201995..9205093)

NW_026947495.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene integrin subunit alpha 4 Neighboring gene ceramide kinase like Neighboring gene nicotinamide phosphoribosyltransferase-like Neighboring gene uncharacterized LOC134478327

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables E-box binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axon development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nervous system development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sensory organ development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
neurogenic differentiation factor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCavPor4.1

Genomic

  1. NW_026947495.1 Reference mCavPor4.1

    Range
    68398879..68403058 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003478499.5 → XP_003478547.1  neurogenic differentiation factor 1

    UniProtKB/TrEMBL
    H0W8C7
    Related
    ENSCPOP00000019233.1
    Conserved Domains (2) summary
    cd00083
    Location:99 → 157
    HLH; Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors; 60-100 amino acids long. A DNA-binding basic region is followed by two alpha-helices separated by a variable loop region; HLH forms homo- and heterodimers, ...
    pfam12533
    Location:159 → 283
    Neuro_bHLH; Neuronal helix-loop-helix transcription factor
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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