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pmvk phosphomevalonate kinase [ Oreochromis niloticus (Nile tilapia) ]

Gene ID: 100708938, updated on 8-Mar-2024

Summary

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Gene symbol
pmvk
Gene description
phosphomevalonate kinase
See related
Ensembl:ENSONIG00000001404
Gene type
protein coding
RefSeq status
MODEL
Organism
Oreochromis niloticus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Oreochromini; Oreochromis
Expression
Ubiquitous expression in liver (RPKM 31.5), ovary (RPKM 23.2) and 9 other tissues See more
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG11
Exon count:
5
Annotation release Status Assembly LG Location
104 current O_niloticus_UMD_NMBU (GCF_001858045.2) LG11 NC_031976.2 (38690414..38692425)
103 previous assembly ASM185804v2 (GCF_001858045.1) LG11 NC_031976.1 (7801020..7803078)

Linkage Group LG11 - NC_031976.2Genomic Context describing neighboring genes Neighboring gene ankyrin repeat domain 34A Neighboring gene 2,4-dienoyl CoA reductase 1, mitochondrial Neighboring gene tropomyosin alpha-3 chain Neighboring gene rho/rac guanine nucleotide exchange factor (GEF) 2b

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Oreochromis niloticus Transcriptome or Gene expression Oreochromis niloticus Transcriptome or Gene expression
  • Description: Oreochromis niloticus (Nile Tilapia) RNA sequencing from multiple tissues.
  • BioProject: PRJNA78915
  • Analysis date: Fri Dec 29 00:23:36 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphomevalonate kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cholesterol biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in isopentenyl diphosphate biosynthetic process, mevalonate pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphomevalonate kinase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oreochromis niloticus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference O_niloticus_UMD_NMBU Primary Assembly

Genomic

  1. NC_031976.2 Reference O_niloticus_UMD_NMBU Primary Assembly

    Range
    38690414..38692425
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003457564.5 → XP_003457612.1  phosphomevalonate kinase isoform X1

    UniProtKB/TrEMBL
    I3IYT1
    Related
    ENSONIP00000001771.1, ENSONIT00000001770.2
    Conserved Domains (1) summary
    pfam04275
    Location:14 → 123
    P-mevalo_kinase; Phosphomevalonate kinase

  2. XM_005462359.4 → XP_005462416.1  phosphomevalonate kinase isoform X2

    Conserved Domains (1) summary
    pfam04275
    Location:14 → 105
    P-mevalo_kinase; Phosphomevalonate kinase
Nucleotide Protein
Heading Accession and Version

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