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kbtbd8 kelch repeat and BTB (POZ) domain containing 8 [ Oreochromis niloticus (Nile tilapia) ]

Gene ID: 100708419, updated on 8-Mar-2024

Summary

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Gene symbol
kbtbd8
Gene description
kelch repeat and BTB (POZ) domain containing 8
See related
Ensembl:ENSONIG00000020352
Gene type
protein coding
RefSeq status
MODEL
Organism
Oreochromis niloticus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Oreochromini; Oreochromis
Expression
Broad expression in testis (RPKM 8.6), blood (RPKM 4.9) and 8 other tissues See more
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG5
Exon count:
6
Annotation release Status Assembly LG Location
104 current O_niloticus_UMD_NMBU (GCF_001858045.2) LG5 NC_031970.2 (29435664..29444905)
103 previous assembly ASM185804v2 (GCF_001858045.1) LG5 NC_031970.1 (9484329..9493719, complement)

Linkage Group LG5 - NC_031970.2Genomic Context describing neighboring genes Neighboring gene leucine-rich repeats and immunoglobulin-like domains 1 Neighboring gene transfer RNA arginine (anticodon ACG) Neighboring gene monocarboxylate transporter 2 Neighboring gene uncharacterized LOC106098039 Neighboring gene uncharacterized LOC112846961

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Oreochromis niloticus Transcriptome or Gene expression Oreochromis niloticus Transcriptome or Gene expression
  • Description: Oreochromis niloticus (Nile Tilapia) RNA sequencing from multiple tissues.
  • BioProject: PRJNA78915
  • Analysis date: Fri Dec 29 00:23:36 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kelch repeat and BTB domain-containing protein 8
Names
kelch repeat and BTB domain containing 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oreochromis niloticus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference O_niloticus_UMD_NMBU Primary Assembly

Genomic

  1. NC_031970.2 Reference O_niloticus_UMD_NMBU Primary Assembly

    Range
    29435664..29444905
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003442681.4 → XP_003442729.1  kelch repeat and BTB domain-containing protein 8 isoform X1

    UniProtKB/TrEMBL
    A0A669DAH7, I3KX02
    Related
    ENSONIP00000057598.1, ENSONIT00000052075.1
    Conserved Domains (4) summary
    PHA03098
    Location:40 → 519
    PHA03098; kelch-like protein; Provisional
    sd00038
    Location:333 → 379
    Kelch; KELCH repeat [structural motif]
    cl38908
    Location:26 → 154
    BTB_POZ; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain superfamily
    cl28903
    Location:146 → 242
    BACK; BACK (BTB and C-terminal Kelch) domain

  2. XM_025907428.1 → XP_025763213.1  kelch repeat and BTB domain-containing protein 8 isoform X2

    UniProtKB/TrEMBL
    I3KX02
    Conserved Domains (2) summary
    sd00038
    Location:257 → 303
    Kelch; KELCH repeat [structural motif]
    cl28614
    Location:27 → 443
    BTB; Broad-Complex, Tramtrack and Bric a brac
Nucleotide Protein
Heading Accession and Version

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