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blcap bladder cancer associated protein [ Oreochromis niloticus (Nile tilapia) ]

Gene ID: 100704799, updated on 8-Mar-2024

Summary

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Gene symbol
blcap
Gene description
bladder cancer associated protein
See related
Ensembl:ENSONIG00000035245
Gene type
protein coding
RefSeq status
MODEL
Organism
Oreochromis niloticus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Oreochromini; Oreochromis
Expression
Ubiquitous expression in testis (RPKM 50.0), skeletal muscle (RPKM 46.5) and 9 other tissues See more
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG5
Exon count:
2
Annotation release Status Assembly LG Location
104 current O_niloticus_UMD_NMBU (GCF_001858045.2) LG5 NC_031970.2 (13087990..13092050)
103 previous assembly ASM185804v2 (GCF_001858045.1) LG5 NC_031970.1 (24177063..24181111)

Linkage Group LG5 - NC_031970.2Genomic Context describing neighboring genes Neighboring gene minichromosome maintenance complex component 2 Neighboring gene podocalyxin-like 2 Neighboring gene RIPOR family member 3 Neighboring gene uncharacterized LOC112846894 Neighboring gene chromodomain helicase DNA binding protein 6 Neighboring gene R-spondin 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Oreochromis niloticus Transcriptome or Gene expression Oreochromis niloticus Transcriptome or Gene expression
  • Description: Oreochromis niloticus (Nile Tilapia) RNA sequencing from multiple tissues.
  • BioProject: PRJNA78915
  • Analysis date: Fri Dec 29 00:23:36 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
bladder cancer-associated protein
Names
BLCAP apoptosis inducing factor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oreochromis niloticus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference O_niloticus_UMD_NMBU Primary Assembly

Genomic

  1. NC_031970.2 Reference O_niloticus_UMD_NMBU Primary Assembly

    Range
    13087990..13092050
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003447656.5 → XP_003447704.1  bladder cancer-associated protein

    See identical proteins and their annotated locations for XP_003447704.1

    UniProtKB/TrEMBL
    A0A669CMF9
    Conserved Domains (1) summary
    pfam06726
    Location:1 → 65
    BC10; Bladder cancer-related protein BC10

  2. XM_019359137.2 → XP_019214682.1  bladder cancer-associated protein

    UniProtKB/TrEMBL
    A0A669CMF9
    Related
    ENSONIP00000049492.1, ENSONIT00000078795.1
    Conserved Domains (1) summary
    pfam06726
    Location:1 → 65
    BC10; Bladder cancer-related protein BC10
Nucleotide Protein
Heading Accession and Version

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