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msrb3 methionine sulfoxide reductase B3 [ Oreochromis niloticus (Nile tilapia) ]

Gene ID: 100702760, updated on 8-Mar-2024

Summary

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Gene symbol
msrb3
Gene description
methionine sulfoxide reductase B3
See related
Ensembl:ENSONIG00000014162
Gene type
protein coding
RefSeq status
MODEL
Organism
Oreochromis niloticus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Oreochromini; Oreochromis
Expression
Ubiquitous expression in eye (RPKM 73.8), heart (RPKM 63.8) and 9 other tissues See more
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG17
Exon count:
8
Annotation release Status Assembly LG Location
104 current O_niloticus_UMD_NMBU (GCF_001858045.2) LG17 NC_031981.2 (575993..584739)
103 previous assembly ASM185804v2 (GCF_001858045.1) LG17 NC_031981.1 (1059036..1067782, complement)

Linkage Group LG17 - NC_031981.2Genomic Context describing neighboring genes Neighboring gene transmembrane BAX inhibitor motif containing 4 Neighboring gene LEM domain containing 3 Neighboring gene uncharacterized LOC109195044 Neighboring gene deoxyribose-phosphate aldolase (putative) Neighboring gene uncharacterized LOC109195045

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Oreochromis niloticus Transcriptome or Gene expression Oreochromis niloticus Transcriptome or Gene expression
  • Description: Oreochromis niloticus (Nile Tilapia) RNA sequencing from multiple tissues.
  • BioProject: PRJNA78915
  • Analysis date: Fri Dec 29 00:23:36 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptide-methionine (R)-S-oxide reductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to oxidative stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
methionine-R-sulfoxide reductase B3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oreochromis niloticus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference O_niloticus_UMD_NMBU Primary Assembly

Genomic

  1. NC_031981.2 Reference O_niloticus_UMD_NMBU Primary Assembly

    Range
    575993..584739
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005460362.3 → XP_005460419.1  methionine-R-sulfoxide reductase B3 isoform X1

    UniProtKB/TrEMBL
    A0A669F462
    Related
    ENSONIP00000079492.1, ENSONIT00000072519.1
    Conserved Domains (1) summary
    PRK00222
    Location:47 → 173
    PRK00222; peptide-methionine (R)-S-oxide reductase MsrB

  2. XM_005460363.4 → XP_005460420.1  methionine-R-sulfoxide reductase B3 isoform X2

    UniProtKB/TrEMBL
    A0A669EGS2
    Related
    ENSONIP00000070262.1, ENSONIT00000074380.1
    Conserved Domains (1) summary
    pfam01641
    Location:45 → 164
    SelR; SelR domain

  3. XM_003455656.4 → XP_003455704.1  methionine-R-sulfoxide reductase B3 isoform X3

    See identical proteins and their annotated locations for XP_003455704.1

    UniProtKB/TrEMBL
    I3K9K8
    Related
    ENSONIP00000017803.2, ENSONIT00000017818.2
    Conserved Domains (1) summary
    pfam01641
    Location:42 → 161
    SelR; SelR domain

  4. XM_005460364.4 → XP_005460421.1  methionine-R-sulfoxide reductase B3 isoform X3

    See identical proteins and their annotated locations for XP_005460421.1

    UniProtKB/TrEMBL
    I3K9K8
    Conserved Domains (1) summary
    pfam01641
    Location:42 → 161
    SelR; SelR domain
Nucleotide Protein
Heading Accession and Version

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