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incenp inner centromere protein [ Oreochromis niloticus (Nile tilapia) ]

Gene ID: 100691707, updated on 8-Mar-2024

Summary

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Gene symbol
incenp
Gene description
inner centromere protein
See related
Ensembl:ENSONIG00000015571
Gene type
protein coding
RefSeq status
MODEL
Organism
Oreochromis niloticus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Oreochromini; Oreochromis
Expression
Biased expression in ovary (RPKM 142.3), testis (RPKM 42.4) and 2 other tissues See more
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: LG7
Exon count:
23
Annotation release Status Assembly LG Location
104 current O_niloticus_UMD_NMBU (GCF_001858045.2) LG7 NC_031972.2 (50886499..50899639, complement)
103 previous assembly ASM185804v2 (GCF_001858045.1) LG7 NC_031972.1 (46264796..46277848)

Linkage Group LG7 - NC_031972.2Genomic Context describing neighboring genes Neighboring gene eosinophil peroxidase Neighboring gene RAB3A interacting protein (rabin3)-like 1 Neighboring gene bestrophin 1 Neighboring gene ferritin, heavy polypeptide 1b Neighboring gene protein phosphatase 1 regulatory subunit 12A Neighboring gene protein-glucosylgalactosylhydroxylysine glucosidase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Oreochromis niloticus Transcriptome or Gene expression
  • Description: Oreochromis niloticus (Nile Tilapia) RNA sequencing from multiple tissues.
  • BioProject: PRJNA78915
  • Analysis date: Fri Dec 29 00:23:36 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein serine/threonine kinase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in meiotic spindle midzone assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in metaphase chromosome alignment IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic cytokinesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of chromosome passenger complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in kinetochore IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in meiotic spindle midzone IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in midbody IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
inner centromere protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oreochromis niloticus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference O_niloticus_UMD_NMBU Primary Assembly

Genomic

  1. NC_031972.2 Reference O_niloticus_UMD_NMBU Primary Assembly

    Range
    50886499..50899639 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025909212.1 → XP_025764997.1  inner centromere protein isoform X1

    UniProtKB/TrEMBL
    I3KEQ0
    Conserved Domains (3) summary
    PTZ00121
    Location:469 → 696
    PTZ00121; MAEBL; Provisional
    pfam03941
    Location:761 → 815
    INCENP_ARK-bind; Inner centromere protein, ARK binding region
    pfam12178
    Location:6 → 40
    INCENP_N; Chromosome passenger complex (CPC) protein INCENP N terminal

  2. XM_005470621.4 → XP_005470678.1  inner centromere protein isoform X2

    UniProtKB/TrEMBL
    I3KEQ0
    Related
    ENSONIP00000019595.2, ENSONIT00000019612.2
    Conserved Domains (3) summary
    PTZ00121
    Location:461 → 690
    PTZ00121; MAEBL; Provisional
    pfam03941
    Location:755 → 809
    INCENP_ARK-bind; Inner centromere protein, ARK binding region
    pfam12178
    Location:6 → 40
    INCENP_N; Chromosome passenger complex (CPC) protein INCENP N terminal

  3. XM_013268721.3 → XP_013124175.1  inner centromere protein isoform X4

    UniProtKB/TrEMBL
    I3KEQ0
    Conserved Domains (3) summary
    PTZ00121
    Location:469 → 696
    PTZ00121; MAEBL; Provisional
    pfam03941
    Location:740 → 794
    INCENP_ARK-bind; Inner centromere protein, ARK binding region
    pfam12178
    Location:6 → 40
    INCENP_N; Chromosome passenger complex (CPC) protein INCENP N terminal

  4. XM_005470620.4 → XP_005470677.1  inner centromere protein isoform X1

    UniProtKB/TrEMBL
    I3KEQ0
    Conserved Domains (3) summary
    PTZ00121
    Location:469 → 696
    PTZ00121; MAEBL; Provisional
    pfam03941
    Location:761 → 815
    INCENP_ARK-bind; Inner centromere protein, ARK binding region
    pfam12178
    Location:6 → 40
    INCENP_N; Chromosome passenger complex (CPC) protein INCENP N terminal

  5. XM_013268720.3 → XP_013124174.1  inner centromere protein isoform X3

    UniProtKB/TrEMBL
    I3KEQ0
    Conserved Domains (3) summary
    pfam03941
    Location:765 → 781
    INCENP_ARK-bind; Inner centromere protein, ARK binding region
    pfam10211
    Location:637 → 689
    Ax_dynein_light; Axonemal dynein light chain
    pfam12178
    Location:6 → 40
    INCENP_N; Chromosome passenger complex (CPC) protein INCENP N terminal
Nucleotide Protein
Heading Accession and Version

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