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OTOA otoancorin [ Loxodonta africana (African savanna elephant) ]

Gene ID: 100673126, updated on 11-Apr-2024

Summary

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Gene symbol
OTOA
Gene description
otoancorin
See related
EnsemblRapid:ENSLAFG00000030589
Gene type
protein coding
RefSeq status
MODEL
Organism
Loxodonta africana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Proboscidea; Elephantidae; Loxodonta
Orthologs
human mouse all
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Genomic context

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See OTOA in Genome Data Viewer
Location:
chromosome: 12
Exon count:
30
Annotation release Status Assembly Chr Location
RS_2024_04 current mLoxAfr1.hap2 (GCF_030014295.1) 12 NC_087353.1 (78751709..78839229)
102 previous assembly Loxafr3.0 (GCF_000001905.1) Unplaced Scaffold NW_003573485.1 (4505300..4591504)

Chromosome 12 - NC_087353.1Genomic Context describing neighboring genes Neighboring gene cerebellar degeneration related protein 2 Neighboring gene U6 spliceosomal RNA Neighboring gene methyltransferase 9, His-X-His N1(pi)-histidine Neighboring gene U6 snRNA-associated Sm-like protein LSm3 Neighboring gene immunoglobulin superfamily member 6 Neighboring gene heparan sulfate-glucosamine 3-sulfotransferase 2 Neighboring gene ubiquitin specific peptidase 31

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cell-matrix adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
otoancorin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030014295.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mLoxAfr1.hap2

Genomic

  1. NC_087353.1 Reference mLoxAfr1.hap2

    Range
    78751709..78839229
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023558998.2 → XP_023414766.1  otoancorin

    UniProtKB/TrEMBL
    G3UCM8
    Related
    ENSLAFP00000025586.2, ENSLAFT00000026892.2
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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