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LOC100671682 histone H2B type 1-B [ Loxodonta africana (African savanna elephant) ]

Gene ID: 100671682, updated on 11-Apr-2024

Summary

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Gene symbol
LOC100671682
Gene description
histone H2B type 1-B
See related
EnsemblRapid:ENSLAFG00000038459
Gene type
protein coding
RefSeq status
MODEL
Organism
Loxodonta africana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Proboscidea; Elephantidae; Loxodonta
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Genomic context

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Location:
chromosome: 1
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_04 current mLoxAfr1.hap2 (GCF_030014295.1) 1 NC_087342.1 (71333557..71339860, complement)
102 previous assembly Loxafr3.0 (GCF_000001905.1) Unplaced Scaffold NW_003573464.1 (520568..522445)

Chromosome 1 - NC_087342.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100671112 Neighboring gene histone H3.1 Neighboring gene histone H2A type 1-D Neighboring gene histone H2A type 1-D Neighboring gene histone H1.2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein heterodimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of chromatin IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of nucleosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histone H2B type 1-B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030014295.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mLoxAfr1.hap2

Genomic

  1. NC_087342.1 Reference mLoxAfr1.hap2

    Range
    71333557..71339860 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023555720.2 → XP_023411488.1  histone H2B type 1-B

    UniProtKB/TrEMBL
    G3TXK5, G3UAY2
    Related
    ENSLAFP00000048689.1, ENSLAFT00000041122.1
    Conserved Domains (1) summary
    smart00427
    Location:28 → 124
    H2B; Histone H2B
Nucleotide Protein
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