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LOC100669150 guanine nucleotide-binding protein subunit alpha-15 [ Loxodonta africana (African savanna elephant) ]

Gene ID: 100669150, updated on 11-Apr-2024

Summary

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Gene symbol
LOC100669150
Gene description
guanine nucleotide-binding protein subunit alpha-15
See related
EnsemblRapid:ENSLAFG00000037892
Gene type
protein coding
RefSeq status
MODEL
Organism
Loxodonta africana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Proboscidea; Elephantidae; Loxodonta
Also known as
S1PR4
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Genomic context

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See LOC100669150 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_04 current mLoxAfr1.hap2 (GCF_030014295.1) 3 NC_087344.1 (5636548..5683471)
102 previous assembly Loxafr3.0 (GCF_000001905.1) Unplaced Scaffold NW_003573545.1 (1342657..1360871)

Chromosome 3 - NC_087344.1Genomic Context describing neighboring genes Neighboring gene TLE family member 5, transcriptional modulator Neighboring gene G protein subunit alpha 11 Neighboring gene nicalin Neighboring gene CUGBP Elav-like family member 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables G protein-coupled receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables G-protein beta/gamma-subunit complex binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables guanyl nucleotide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sphingosine-1-phosphate receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in action potential IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in adenylate cyclase-activating G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phospholipase C-activating dopamine receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of heterotrimeric G-protein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
guanine nucleotide-binding protein subunit alpha-15; sphingosine 1-phosphate receptor 4
Names
sphingosine-1-phosphate receptor 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030014295.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mLoxAfr1.hap2

Genomic

  1. NC_087344.1 Reference mLoxAfr1.hap2

    Range
    5636548..5683471
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_064280249.1 → XP_064136319.1  sphingosine 1-phosphate receptor 4 isoform X1

    Related
    ENSLAFP00000030013.1, ENSLAFT00000040283.1

  2. XM_064280250.1 → XP_064136320.1  guanine nucleotide-binding protein subunit alpha-15 isoform X3

  3. XM_023540936.2 → XP_023396704.1  sphingosine 1-phosphate receptor 4 isoform X2

    Conserved Domains (2) summary
    cd15349
    Location:99 → 123
    7tmA_S1PR4_Edg6; TM helix 1 [structural motif]
    cl28897
    Location:97 → 362
    7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily
Nucleotide Protein
Heading Accession and Version

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