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TNFSF9 TNF superfamily member 9 [ Loxodonta africana (African savanna elephant) ]

Gene ID: 100661208, updated on 11-Apr-2024

Summary

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Gene symbol
TNFSF9
Gene description
TNF superfamily member 9
See related
EnsemblRapid:ENSLAFG00000039546
Gene type
protein coding
RefSeq status
MODEL
Organism
Loxodonta africana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Proboscidea; Elephantidae; Loxodonta
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_04 current mLoxAfr1.hap2 (GCF_030014295.1) 3 NC_087344.1 (8796833..8815309, complement)
102 previous assembly Loxafr3.0 (GCF_000001905.1) Unplaced Scaffold NW_003573539.1 (1121458..1125971)

Chromosome 3 - NC_087344.1Genomic Context describing neighboring genes Neighboring gene small ribosomal subunit protein eS24-like Neighboring gene CD70 molecule Neighboring gene tubulin beta 4A class IVa Neighboring gene DENN domain containing 1C

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables tumor necrosis factor receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of activated T cell proliferation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of cytotoxic T cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tumor necrosis factor ligand superfamily member 9
Names
tumor necrosis factor superfamily member 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030014295.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mLoxAfr1.hap2

Genomic

  1. NC_087344.1 Reference mLoxAfr1.hap2

    Range
    8796833..8815309 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003421683.3 → XP_003421731.1  tumor necrosis factor ligand superfamily member 9

    Related
    ENSLAFP00000035646.1, ENSLAFT00000066795.1
    Conserved Domains (1) summary
    cl00147
    Location:169 → 307
    TNF; Tumor Necrosis Factor; TNF superfamily members include the cytokines: TNF (TNF-alpha), LT (lymphotoxin-alpha, TNF-beta), CD40 ligand, Apo2L (TRAIL), Fas ligand, and osteoprotegerin (OPG) ligand. These proteins generally have an intracellular N-terminal ...
Nucleotide Protein
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