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C1GALT1C1 C1GALT1 specific chaperone 1 [ Loxodonta africana (African savanna elephant) ]

Gene ID: 100659442, updated on 11-Apr-2024

Summary

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Gene symbol
C1GALT1C1
Gene description
C1GALT1 specific chaperone 1
See related
EnsemblRapid:ENSLAFG00000044400
Gene type
protein coding
RefSeq status
MODEL
Organism
Loxodonta africana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Proboscidea; Elephantidae; Loxodonta
Orthologs
human mouse all
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Genomic context

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See C1GALT1C1 in Genome Data Viewer
Location:
chromosome: X
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_04 current mLoxAfr1.hap2 (GCF_030014295.1) X NC_087369.1 (142535058..142538892, complement)
102 previous assembly Loxafr3.0 (GCF_000001905.1) Unplaced Scaffold NW_003573452.1 (9925681..9929476)

Chromosome X - NC_087369.1Genomic Context describing neighboring genes Neighboring gene cullin 4B Neighboring gene MCTS1 re-initiation and release factor Neighboring gene uncharacterized LOC111751863 Neighboring gene uncharacterized LOC135228889

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in O-glycan processing, core 1 IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C1GALT1-specific chaperone 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030014295.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mLoxAfr1.hap2

Genomic

  1. NC_087369.1 Reference mLoxAfr1.hap2

    Range
    142535058..142538892 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003414764.4 → XP_003414812.1  C1GALT1-specific chaperone 1

    UniProtKB/TrEMBL
    G3TET9
    Related
    ENSLAFP00000032522.1, ENSLAFT00000053707.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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