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PTRH2 peptidyl-tRNA hydrolase 2 [ Loxodonta africana (African savanna elephant) ]

Gene ID: 100655375, updated on 11-Apr-2024

Summary

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Gene symbol
PTRH2
Gene description
peptidyl-tRNA hydrolase 2
See related
EnsemblRapid:ENSLAFG00000038016
Gene type
protein coding
RefSeq status
MODEL
Organism
Loxodonta africana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Proboscidea; Elephantidae; Loxodonta
Orthologs
human mouse all
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Genomic context

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See PTRH2 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_04 current mLoxAfr1.hap2 (GCF_030014295.1) 18 NC_087359.1 (48788475..48796641, complement)
102 previous assembly Loxafr3.0 (GCF_000001905.1) Unplaced Scaffold NW_003573451.1 (9228834..9236992)

Chromosome 18 - NC_087359.1Genomic Context describing neighboring genes Neighboring gene mesoderm-specific transcript homolog protein-like Neighboring gene DEAH-box helicase 40 Neighboring gene U6 spliceosomal RNA Neighboring gene clathrin heavy chain Neighboring gene vacuole membrane protein 1 Neighboring gene tubulin delta 1 Neighboring gene uncharacterized LOC135228095 Neighboring gene ribosomal protein S6 kinase B1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables aminoacyl-tRNA hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of anoikis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of anoikis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
peptidyl-tRNA hydrolase 2, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030014295.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mLoxAfr1.hap2

Genomic

  1. NC_087359.1 Reference mLoxAfr1.hap2

    Range
    48788475..48796641 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003414580.4 → XP_003414628.1  peptidyl-tRNA hydrolase 2, mitochondrial

    UniProtKB/TrEMBL
    G3UA53
    Related
    ENSLAFP00000048009.1, ENSLAFT00000042763.1
    Conserved Domains (1) summary
    cd02430
    Location:65 → 179
    PTH2; Peptidyl-tRNA hydrolase, type 2 (PTH2). Peptidyl-tRNA hydrolase (PTH) activity releases tRNA from the premature translation termination product peptidyl-tRNA, therefore allowing the tRNA and peptide to be reused in protein synthesis. PTH2 is present in ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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