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SEMA5B semaphorin 5B [ Loxodonta africana (African savanna elephant) ]

Gene ID: 100653756, updated on 6-Jun-2024

Summary

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Gene symbol
SEMA5B
Gene description
semaphorin 5B
See related
EnsemblRapid:ENSLAFG00000001249
Gene type
protein coding
RefSeq status
MODEL
Organism
Loxodonta africana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Proboscidea; Elephantidae; Loxodonta
Orthologs
human mouse all
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Genomic context

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See SEMA5B in Genome Data Viewer
Location:
chromosome: 1
Exon count:
21
Annotation release Status Assembly Chr Location
RS_2024_04 current mLoxAfr1.hap2 (GCF_030014295.1) 1 NC_087342.1 (13530422..13572909, complement)
102 previous assembly Loxafr3.0 (GCF_000001905.1) Unplaced Scaffold NW_003573445.1 (21858059..21921120)

Chromosome 1 - NC_087342.1Genomic Context describing neighboring genes Neighboring gene HSPB1 associated protein 1 Neighboring gene uncharacterized LOC135232421 Neighboring gene large ribosomal subunit protein eL31-like Neighboring gene solute carrier family 49 member 4 Neighboring gene protein disulfide isomerase family A member 5 Neighboring gene large ribosomal subunit protein eL43-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chemorepellent activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables semaphorin receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of axon extension involved in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neural crest cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in semaphorin-plexin signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
semaphorin-5B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030014295.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mLoxAfr1.hap2

Genomic

  1. NC_087342.1 Reference mLoxAfr1.hap2

    Range
    13530422..13572909 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023551705.2 → XP_023407473.2  semaphorin-5B

    UniProtKB/TrEMBL
    G3UGW1
    Related
    ENSLAFP00000027069.2, ENSLAFT00000029000.2
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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