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CFAP52 cilia and flagella associated protein 52 [ Pan troglodytes (chimpanzee) ]

Gene ID: 100614756, updated on 29-Mar-2024

Summary

Official Symbol
CFAP52provided by VGNC
Official Full Name
cilia and flagella associated protein 52provided by VGNC
Primary source
VGNC:VGNC:9232
Locus tag
CK820_G0021134
See related
Ensembl:ENSPTRG00000008755
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Also known as
WDR16
Orthologs
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Genomic context

See CFAP52 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 19 NC_072417.2 (61064010..61126208, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 17 NC_072415.1 (59248465..59310634, complement)

Chromosome 19 - NC_072417.2Genomic Context describing neighboring genes Neighboring gene dehydrogenase/reductase 7C Neighboring gene ubiquitin specific peptidase 43 Neighboring gene uncharacterized LOC104002921 Neighboring gene large ribosomal subunit protein eL19-like Neighboring gene syntaxin 8 Neighboring gene uncharacterized LOC129137626 Neighboring gene uncharacterized LOC107969256 Neighboring gene netrin 1

Genomic regions, transcripts, and products

General protein information

Preferred Names
cilia- and flagella-associated protein 52
Names
WD repeat domain 16

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072417.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    61064010..61126208 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016932399.3XP_016787888.1  cilia- and flagella-associated protein 52 isoform X2

    UniProtKB/TrEMBL
    A0A2J8MGQ0, A0A6D2XE61, H2QC92
  2. XM_016932398.3XP_016787887.1  cilia- and flagella-associated protein 52 isoform X1

    UniProtKB/TrEMBL
    A0A2J8MGQ0, A0A6D2XE61, H2QC92
    Related
    ENSPTRP00000014914.3
    Conserved Domains (3) summary
    COG2319
    Location:1432
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:447486
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:373642
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
  3. XM_016932400.4XP_016787889.1  cilia- and flagella-associated protein 52 isoform X3

    UniProtKB/TrEMBL
    A0A2J8MGQ0, A0A6D2XE61, H2QC92
    Conserved Domains (3) summary
    COG2319
    Location:15367
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:382421
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:308577
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
  4. XM_016932403.2XP_016787892.1  cilia- and flagella-associated protein 52 isoform X5

    UniProtKB/TrEMBL
    A0A2J8MGQ8, A0A6D2Y805, H2RD00
    Related
    ENSPTRP00000058102.2
    Conserved Domains (3) summary
    COG2319
    Location:4316
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:331370
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:257526
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
  5. XM_016932401.3XP_016787890.1  cilia- and flagella-associated protein 52 isoform X4

    UniProtKB/TrEMBL
    A0A2J8MGQ0, A0A6D2XE61, H2QC92
    Conserved Domains (3) summary
    smart00320
    Location:127168
    WD40; WD40 repeats
    sd00039
    Location:321357
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:291559
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...