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ADAMTSL1 ADAMTS like 1 [ Nomascus leucogenys (northern white-cheeked gibbon) ]

Gene ID: 100606620, updated on 8-Mar-2024

Summary

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Gene symbol
ADAMTSL1
Gene description
ADAMTS like 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Nomascus leucogenys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Nomascus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1a
Exon count:
29
Annotation release Status Assembly Chr Location
103 current Asia_NLE_v1 (GCF_006542625.1) 1a NC_044381.1 (19174532..19620411)
102 previous assembly Nleu_3.0 (GCF_000146795.2) 1a NC_019816.1 (19758273..20228506)

Chromosome 1a - NC_044381.1Genomic Context describing neighboring genes Neighboring gene SH3 domain containing GRB2 like 2, endophilin A1 Neighboring gene ATP-dependent RNA helicase DDX50-like Neighboring gene 28S ribosomal protein S33, mitochondrial pseudogene Neighboring gene ras-related protein Rap-1b pseudogene Neighboring gene 26S proteasome regulatory subunit 6A pseudogene Neighboring gene stabilizer of axonemal microtubules 1 Neighboring gene Ras related GTP binding A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in extracellular matrix organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ADAMTS-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nomascus leucogenys Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Asia_NLE_v1 Primary Assembly

Genomic

  1. NC_044381.1 Reference Asia_NLE_v1 Primary Assembly

    Range
    19174532..19620411
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003260400.2 → XP_003260448.2  ADAMTS-like protein 1

    UniProtKB/TrEMBL
    A0A2I3HWJ9
    Conserved Domains (6) summary
    smart00408
    Location:1410 → 1476
    IGc2; Immunoglobulin C-2 Type
    smart00209
    Location:36 → 82
    TSP1; Thrombospondin type 1 repeats
    PTZ00441
    Location:428 → 506
    PTZ00441; sporozoite surface protein 2 (SSP2); Provisional
    cd00096
    Location:1304 → 1367
    Ig; Immunoglobulin domain
    pfam00090
    Location:735 → 788
    TSP_1; Thrombospondin type 1 domain
    pfam08686
    Location:1730 → 1759
    PLAC; PLAC (protease and lacunin) domain
Nucleotide Protein
Heading Accession and Version

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