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SEMA4F ssemaphorin 4F [ Nomascus leucogenys (northern white-cheeked gibbon) ]

Gene ID: 100595747, updated on 8-Mar-2024

Summary

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Gene symbol
SEMA4F
Gene description
ssemaphorin 4F
See related
EnsemblRapid:ENSNLEG00000001057
Gene type
protein coding
RefSeq status
MODEL
Organism
Nomascus leucogenys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Nomascus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 14
Exon count:
15
Annotation release Status Assembly Chr Location
103 current Asia_NLE_v1 (GCF_006542625.1) 14 NC_044394.1 (59116892..59146840)
102 previous assembly Nleu_3.0 (GCF_000146795.2) 14 NC_019829.1 (60011982..60049350)

Chromosome 14 - NC_044394.1Genomic Context describing neighboring genes Neighboring gene docking protein 1 Neighboring gene meiosis 1 associated protein Neighboring gene Golgi apparatus membrane protein TVP23 homolog B pseudogene Neighboring gene hexokinase 2 Neighboring gene DNA polymerase epsilon 4, accessory subunit

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chemorepellent activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables semaphorin receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative chemotaxis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of axon extension involved in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neural crest cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in semaphorin-plexin signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
semaphorin-4F

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nomascus leucogenys Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Asia_NLE_v1 Primary Assembly

Genomic

  1. NC_044394.1 Reference Asia_NLE_v1 Primary Assembly

    Range
    59116892..59146840
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030827609.1 → XP_030683469.1  semaphorin-4F isoform X1

    UniProtKB/TrEMBL
    A0A2I3I038
    Related
    ENSNLEP00000001234.3, ENSNLET00000001309.3
    Conserved Domains (3) summary
    cd11261
    Location:52 → 511
    Sema_4F; The Sema domain, a protein interacting module, of semaphorin 4F (Sema4F)
    smart00423
    Location:512 → 563
    PSI; domain found in Plexins, Semaphorins and Integrins
    cl11960
    Location:570 → 649
    Ig; Immunoglobulin domain

  2. XM_030827610.1 → XP_030683470.1  semaphorin-4F isoform X2

    UniProtKB/TrEMBL
    A0A2I3I038
    Conserved Domains (3) summary
    smart00423
    Location:410 → 439
    PSI; domain found in Plexins, Semaphorins and Integrins
    cl11960
    Location:468 → 547
    Ig; Immunoglobulin domain
    cl15693
    Location:1 → 409
    Sema; The Sema domain, a protein interacting module, of semaphorins and plexins
Nucleotide Protein
Heading Accession and Version

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