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PHTF1 putative homeodomain transcription factor 1 [ Nomascus leucogenys (northern white-cheeked gibbon) ]

Gene ID: 100584275, updated on 8-Mar-2024

Summary

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Gene symbol
PHTF1
Gene description
putative homeodomain transcription factor 1
See related
EnsemblRapid:ENSNLEG00000004383
Gene type
protein coding
RefSeq status
MODEL
Organism
Nomascus leucogenys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Nomascus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 12
Exon count:
24
Annotation release Status Assembly Chr Location
103 current Asia_NLE_v1 (GCF_006542625.1) 12 NC_044392.1 (62235520..62298071)
102 previous assembly Nleu_3.0 (GCF_000146795.2) 12 NC_019827.1 (63987940..64064716)

Chromosome 12 - NC_044392.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115837648 Neighboring gene protein tyrosine phosphatase non-receptor type 22 Neighboring gene round spermatid basic protein 1 Neighboring gene membrane associated guanylate kinase, WW and PDZ domain containing 3 Neighboring gene 40S ribosomal protein S15 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative homeodomain transcription factor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nomascus leucogenys Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Asia_NLE_v1 Primary Assembly

Genomic

  1. NC_044392.1 Reference Asia_NLE_v1 Primary Assembly

    Range
    62235520..62298071
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030824816.1 → XP_030680676.1  putative homeodomain transcription factor 1 isoform X3

    UniProtKB/TrEMBL
    A0A2I3GHT9
    Related
    ENSNLEP00000030871.2, ENSNLET00000037133.2

  2. XM_030824810.1 → XP_030680670.1  putative homeodomain transcription factor 1 isoform X1

    UniProtKB/TrEMBL
    G1QWN1, M3ZBL2
    Conserved Domains (1) summary
    pfam12129
    Location:5 → 151
    Phtf-FEM1B_bdg; Male germ-cell putative homeodomain transcription factor

  3. XM_030824812.1 → XP_030680672.1  putative homeodomain transcription factor 1 isoform X2

    UniProtKB/TrEMBL
    M3ZBL2
    Related
    ENSNLEP00000005352.2, ENSNLET00000005630.3
    Conserved Domains (1) summary
    pfam12129
    Location:1 → 109
    Phtf-FEM1B_bdg; Male germ-cell putative homeodomain transcription factor

  4. XM_003267998.4 → XP_003268046.1  putative homeodomain transcription factor 1 isoform X1

    UniProtKB/TrEMBL
    G1QWN1, M3ZBL2
    Related
    ENSNLEP00000025030.2, ENSNLET00000043441.2
    Conserved Domains (1) summary
    pfam12129
    Location:5 → 151
    Phtf-FEM1B_bdg; Male germ-cell putative homeodomain transcription factor

  5. XM_030824811.1 → XP_030680671.1  putative homeodomain transcription factor 1 isoform X1

    UniProtKB/TrEMBL
    G1QWN1, M3ZBL2
    Conserved Domains (1) summary
    pfam12129
    Location:5 → 151
    Phtf-FEM1B_bdg; Male germ-cell putative homeodomain transcription factor

  6. XM_030824813.1 → XP_030680673.1  putative homeodomain transcription factor 1 isoform X2

    UniProtKB/TrEMBL
    M3ZBL2
    Conserved Domains (1) summary
    pfam12129
    Location:1 → 109
    Phtf-FEM1B_bdg; Male germ-cell putative homeodomain transcription factor

  7. XM_030824817.1 → XP_030680677.1  putative homeodomain transcription factor 1 isoform X4

    UniProtKB/TrEMBL
    M3ZBL2
    Conserved Domains (1) summary
    pfam12129
    Location:5 → 151
    Phtf-FEM1B_bdg; Male germ-cell putative homeodomain transcription factor

  8. XM_030824818.1 → XP_030680678.1  putative homeodomain transcription factor 1 isoform X5

    UniProtKB/TrEMBL
    M3ZBL2
    Related
    ENSNLEP00000024099.3, ENSNLET00000032472.3
    Conserved Domains (1) summary
    pfam12129
    Location:5 → 151
    Phtf-FEM1B_bdg; Male germ-cell putative homeodomain transcription factor

  9. XM_030824814.1 → XP_030680674.1  putative homeodomain transcription factor 1 isoform X2

    UniProtKB/TrEMBL
    M3ZBL2
    Conserved Domains (1) summary
    pfam12129
    Location:1 → 109
    Phtf-FEM1B_bdg; Male germ-cell putative homeodomain transcription factor

  10. XM_030824815.1 → XP_030680675.1  putative homeodomain transcription factor 1 isoform X2

    UniProtKB/TrEMBL
    M3ZBL2
    Conserved Domains (1) summary
    pfam12129
    Location:1 → 109
    Phtf-FEM1B_bdg; Male germ-cell putative homeodomain transcription factor

RNA

  1. XR_004032690.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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