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SHTN1 shootin 1 [ Nomascus leucogenys (northern white-cheeked gibbon) ]

Gene ID: 100583206, updated on 8-Mar-2024

Summary

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Gene symbol
SHTN1
Gene description
shootin 1
See related
EnsemblRapid:ENSNLEG00000016517
Gene type
protein coding
RefSeq status
MODEL
Organism
Nomascus leucogenys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Nomascus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
19
Annotation release Status Assembly Chr Location
103 current Asia_NLE_v1 (GCF_006542625.1) 3 NC_044383.1 (16553077..16675573)
102 previous assembly Nleu_3.0 (GCF_000146795.2) 3 NC_019818.1 (16825289..16949155)

Chromosome 3 - NC_044383.1Genomic Context describing neighboring genes Neighboring gene dnaJ homolog subfamily B member 6-like Neighboring gene U2 spliceosomal RNA Neighboring gene uncharacterized LOC115833236 Neighboring gene enolase 4 Neighboring gene heat shock protein family A (Hsp70) member 12A Neighboring gene 60S ribosomal protein L5-like Neighboring gene sperm microtubule inner protein 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

General protein information

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Preferred Names
shootin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nomascus leucogenys Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Asia_NLE_v1 Primary Assembly

Genomic

  1. NC_044383.1 Reference Asia_NLE_v1 Primary Assembly

    Range
    16553077..16675573
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003254996.4 → XP_003255044.2  shootin-1 isoform X5

    Related
    ENSNLEP00000033102.2, ENSNLET00000036853.2
    Conserved Domains (1) summary
    COG4372
    Location:139 → 343
    COG4372; Uncharacterized conserved protein, contains DUF3084 domain [Function unknown]

  2. XM_030806519.1 → XP_030662379.1  shootin-1 isoform X2

    Conserved Domains (1) summary
    COG4372
    Location:139 → 343
    COG4372; Uncharacterized conserved protein, contains DUF3084 domain [Function unknown]

  3. XM_030806520.1 → XP_030662380.1  shootin-1 isoform X3

    Conserved Domains (1) summary
    COG4372
    Location:139 → 343
    COG4372; Uncharacterized conserved protein, contains DUF3084 domain [Function unknown]

  4. XM_030806523.1 → XP_030662383.1  shootin-1 isoform X4

    Related
    ENSNLEP00000020077.3, ENSNLET00000021083.3
    Conserved Domains (1) summary
    COG4372
    Location:139 → 343
    COG4372; Uncharacterized conserved protein, contains DUF3084 domain [Function unknown]

  5. XM_003254995.4 → XP_003255043.2  shootin-1 isoform X1

    Related
    ENSNLEP00000020080.2, ENSNLET00000021086.3
    Conserved Domains (1) summary
    COG4372
    Location:139 → 343
    COG4372; Uncharacterized conserved protein, contains DUF3084 domain [Function unknown]

RNA

  1. XR_004028664.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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