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SHROOM4 shroom family member 4 [ Nomascus leucogenys (northern white-cheeked gibbon) ]

Gene ID: 100583011, updated on 8-Mar-2024

Summary

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Gene symbol
SHROOM4
Gene description
shroom family member 4
See related
EnsemblRapid:ENSNLEG00000008164
Gene type
protein coding
RefSeq status
MODEL
Organism
Nomascus leucogenys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Nomascus
Orthologs
human mouse all
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Genomic context

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See SHROOM4 in Genome Data Viewer
Location:
chromosome: X
Exon count:
8
Annotation release Status Assembly Chr Location
103 current Asia_NLE_v1 (GCF_006542625.1) X NC_044406.1 (41024553..41073973)
102 previous assembly Nleu_3.0 (GCF_000146795.2) X NC_019841.1 (41175348..41401092)

Chromosome X - NC_044406.1Genomic Context describing neighboring genes Neighboring gene histone H3.3-like Neighboring gene U6 spliceosomal RNA Neighboring gene diacylglycerol kinase kappa Neighboring gene cyclin B3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin filament organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in adherens junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in apical junction complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in apical plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cortical actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein Shroom4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nomascus leucogenys Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Asia_NLE_v1 Primary Assembly

Genomic

  1. NC_044406.1 Reference Asia_NLE_v1 Primary Assembly

    Range
    41024553..41073973
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030807438.1 → XP_030663298.1  protein Shroom4

    UniProtKB/TrEMBL
    G1R9Q8
    Related
    ENSNLEP00000009954.1, ENSNLET00000010439.3
    Conserved Domains (1) summary
    pfam08687
    Location:1120 → 1364
    ASD2; Apx/Shroom domain ASD2
Nucleotide Protein
Heading Accession and Version

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