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MKRN3 makorin ring finger protein 3 [ Nomascus leucogenys (northern white-cheeked gibbon) ]

Gene ID: 100580788, updated on 8-Mar-2024

Summary

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Gene symbol
MKRN3
Gene description
makorin ring finger protein 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Nomascus leucogenys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Nomascus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
2
Annotation release Status Assembly Chr Location
103 current Asia_NLE_v1 (GCF_006542625.1) 6 NC_044386.1 (72013850..72023781)
102 previous assembly Nleu_3.0 (GCF_000146795.2) 6 NC_019821.1 (75436859..75447171, complement)

Chromosome 6 - NC_044386.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100588668 Neighboring gene golgin subfamily A member 6-like protein 22 Neighboring gene MAGE family member L2 Neighboring gene necdin, MAGE family member

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein polyubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable E3 ubiquitin-protein ligase makorin-3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nomascus leucogenys Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Asia_NLE_v1 Primary Assembly

Genomic

  1. NC_044386.1 Reference Asia_NLE_v1 Primary Assembly

    Range
    72013850..72023781
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012507199.1 → XP_012362653.1  probable E3 ubiquitin-protein ligase makorin-3 isoform X2

    Conserved Domains (4) summary
    PHA03096
    Location:251 → 400
    PHA03096; p28-like protein; Provisional
    PRK07764
    Location:33 → 232
    PRK07764; DNA polymerase III subunits gamma and tau; Validated
    cd16730
    Location:308 → 368
    RING-HC_MKRN1_3; RING finger, HC subclass, found in makorin-1 (MKRN1), makorin-3 (MKRN3), and similar proteins
    pfam18044
    Location:99 → 120
    zf-CCCH_4; CCCH-type zinc finger

  2. XM_003277143.4 → XP_003277191.1  probable E3 ubiquitin-protein ligase makorin-3 isoform X1

    Conserved Domains (6) summary
    smart00356
    Location:398 → 422
    ZnF_C3H1; zinc finger
    PHA03096
    Location:251 → 400
    PHA03096; p28-like protein; Provisional
    PRK07764
    Location:33 → 232
    PRK07764; DNA polymerase III subunits gamma and tau; Validated
    cd16730
    Location:308 → 368
    RING-HC_MKRN1_3; RING finger, HC subclass, found in makorin-1 (MKRN1), makorin-3 (MKRN3), and similar proteins
    pfam15815
    Location:422 → 507
    MKRN1_C; E3 ubiquitin-protein ligase makorin-1, C-terminal
    pfam18044
    Location:99 → 120
    zf-CCCH_4; CCCH-type zinc finger
Nucleotide Protein
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