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mtSSB mitochondrial single stranded DNA-binding protein [ Acyrthosiphon pisum (pea aphid) ]

Gene ID: 100574210, updated on 15-May-2024

Summary

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Gene symbol
mtSSB
Gene description
mitochondrial single stranded DNA-binding protein
See related
EnsemblRapid:GeneID_100574210
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Acyrthosiphon pisum
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Sternorrhyncha; Aphidomorpha; Aphidoidea; Aphididae; Macrosiphini; Acyrthosiphon
Also known as
ACYPI38901
Orthologs
fruit fly all
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Genomic context

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Location:
chromosome: A1
Exon count:
5
Annotation release Status Assembly Chr Location
103 current pea_aphid_22Mar2018_4r6ur (GCF_005508785.1) A1 NC_042494.1 (160504613..160507416, complement)
102 previous assembly Acyr_2.0 (GCF_000142985.2) Unplaced Scaffold NW_003383697.1 (172346..175149)

Chromosome A1 - NC_042494.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100165535 Neighboring gene Serine_rich_CAS and FAT-like_CAS_C domain-containing protein p130CAS Neighboring gene GNAT family N-acetyltransferase vnc Neighboring gene NADH-cytochrome b5 reductase-like Neighboring gene protein c-ets-1-B Neighboring gene vacuolar protein sorting 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables single-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial DNA replication IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial nucleoid IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Single-stranded DNA-binding protein, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001246004.2 → NP_001232933.1  Single-stranded DNA-binding protein, mitochondrial

    See identical proteins and their annotated locations for NP_001232933.1

    Status: PROVISIONAL

    Source sequence(s)
    AK340192
    UniProtKB/TrEMBL
    C4WSH6, J9LC16
    Related
    NP_001232933.1, NM_001246004.2
    Conserved Domains (2) summary
    COG0629
    Location:40 → 147
    Ssb; Single-stranded DNA-binding protein [Replication, recombination and repair]
    cl09930
    Location:37 → 147
    RPA_2b-aaRSs_OBF_like; Replication protein A, class 2b aminoacyl-tRNA synthetases, and related proteins with oligonucleotide/oligosaccharide (OB) fold.

RefSeqs of Annotated Genomes: Acyrthosiphon pisum Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference pea_aphid_22Mar2018_4r6ur Primary Assembly

Genomic

  1. NC_042494.1 Reference pea_aphid_22Mar2018_4r6ur Primary Assembly

    Range
    160504613..160507416 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials