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plcd1 phospholipase C delta 1 [ Anolis carolinensis (green anole) ]

Gene ID: 100567266, updated on 8-Mar-2024

Summary

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Gene symbol
plcd1
Gene description
phospholipase C delta 1
See related
Ensembl:ENSACAG00000005221
Gene type
protein coding
RefSeq status
MODEL
Organism
Anolis carolinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Dactyloidae; Anolis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2024_02 current rAnoCar3.1.pri (GCF_035594765.1) 6 NC_085846.1 (113038670..113096145)
102 previous assembly AnoCar2.0 (GCF_000090745.1) 6 NC_014781.1 (1070209..1130537)

Chromosome 6 - NC_085846.1Genomic Context describing neighboring genes Neighboring gene mitogen-activated protein kinase kinase kinase 3 Neighboring gene acetyl-CoA acyltransferase 1 Neighboring gene DLEC1 cilia and flagella associated protein Neighboring gene villin like Neighboring gene CTD small phosphatase like Neighboring gene microRNA mir-26-2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol phospholipase C activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidylinositol-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in release of sequestered calcium ion into cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_035594765.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAnoCar3.1.pri

Genomic

  1. NC_085846.1 Reference rAnoCar3.1.pri

    Range
    113038670..113096145
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003221894.4 → XP_003221942.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 isoform X3

    UniProtKB/TrEMBL
    A0A803T1M3
    Related
    ENSACAP00000029113.1
    Conserved Domains (7) summary
    cd00275
    Location:609 → 735
    C2_PLC_like; C2 domain present in Phosphoinositide-specific phospholipases C (PLC)
    cd08593
    Location:288 → 577
    PI-PLCc_delta; Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta
    PLN02952
    Location:205 → 736
    PLN02952; phosphoinositide phospholipase C
    cd13363
    Location:15 → 132
    PH_PLC_delta; Phospholipase C-delta (PLC-delta) pleckstrin homology (PH) domain
    pfam00169
    Location:23 → 123
    PH; PH domain
    pfam09279
    Location:206 → 288
    EF-hand_like; Phosphoinositide-specific phospholipase C, efhand-like
    pfam14788
    Location:152 → 201
    EF-hand_10; EF hand

  2. XM_062957358.1 → XP_062813428.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 isoform X1

  3. XM_008112210.3 → XP_008110417.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 isoform X4

    UniProtKB/TrEMBL
    G1KDV8
    Related
    ENSACAP00000005163.3
    Conserved Domains (7) summary
    cd00275
    Location:638 → 764
    C2_PLC_like; C2 domain present in Phosphoinositide-specific phospholipases C (PLC)
    cd08593
    Location:317 → 606
    PI-PLCc_delta; Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta
    PLN02952
    Location:234 → 765
    PLN02952; phosphoinositide phospholipase C
    cd13363
    Location:44 → 161
    PH_PLC_delta; Phospholipase C-delta (PLC-delta) pleckstrin homology (PH) domain
    pfam00169
    Location:52 → 152
    PH; PH domain
    pfam09279
    Location:235 → 317
    EF-hand_like; Phosphoinositide-specific phospholipase C, efhand-like
    pfam14788
    Location:181 → 230
    EF-hand_10; EF hand

  4. XM_062957359.1 → XP_062813429.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 isoform X2

Nucleotide Protein
Heading Accession and Version

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