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deaf1 DEAF1 transcription factor [ Anolis carolinensis (green anole) ]

Gene ID: 100564893, updated on 8-Mar-2024

Summary

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Gene symbol
deaf1
Gene description
DEAF1 transcription factor
Gene type
protein coding
RefSeq status
MODEL
Organism
Anolis carolinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Dactyloidae; Anolis
Orthologs
human mouse all
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Genomic context

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See deaf1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2024_02 current rAnoCar3.1.pri (GCF_035594765.1) 1 NC_085841.1 (262931369..262965119, complement)
102 previous assembly AnoCar2.0 (GCF_000090745.1) 1 NC_014776.1 (74134860..74168663)

Chromosome 1 - NC_085841.1Genomic Context describing neighboring genes Neighboring gene cadherin related family member 5 Neighboring gene dopamine receptor D4 Neighboring gene transmembrane protein 80 Neighboring gene EPS8 signaling adaptor L2 Neighboring gene glutamine amidotransferase class 1 domain containing 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
deformed epidermal autoregulatory factor 1 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_035594765.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAnoCar3.1.pri

Genomic

  1. NC_085841.1 Reference rAnoCar3.1.pri

    Range
    262931369..262965119 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_062967590.1 → XP_062823660.1  deformed epidermal autoregulatory factor 1 homolog isoform X2

  2. XM_062967589.1 → XP_062823659.1  deformed epidermal autoregulatory factor 1 homolog isoform X1

  3. XM_062967591.1 → XP_062823661.1  deformed epidermal autoregulatory factor 1 homolog isoform X3

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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