U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC100550557 caskin-1-like [ Meleagris gallopavo (turkey) ]

Gene ID: 100550557, updated on 14-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC100550557
Gene description
caskin-1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Meleagris gallopavo
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Meleagridinae; Meleagris
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC100550557 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
13
Annotation release Status Assembly Chr Location
103 current Turkey_5.1 (GCF_000146605.3) 16 NC_015026.2 (7065858..7074951, complement)
Build 1.1 previous assembly Turkey_2.01 (GCF_000146605.1) 16 NC_015026.1 (6745200..6762864, complement)

Chromosome 16 - NC_015026.2Genomic Context describing neighboring genes Neighboring gene hexosaminidase D-like Neighboring gene phosphoglycolate phosphatase Neighboring gene caskin-1-like Neighboring gene TNF receptor associated factor 7

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
caskin-1-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Meleagris gallopavo Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Turkey_5.1 Primary Assembly

Genomic

  1. NC_015026.2 Reference Turkey_5.1 Primary Assembly

    Range
    7065858..7074951 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031555785.1 → XP_031411645.1  caskin-1-like

    Conserved Domains (6) summary
    sd00045
    Location:32 → 63
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:37 → 136
    Ank_2; Ankyrin repeats (3 copies)
    pfam13637
    Location:1 → 53
    Ank_4; Ankyrin repeats (many copies)
    pfam13857
    Location:126 → 179
    Ank_5; Ankyrin repeats (many copies)
    pfam16600
    Location:293 → 351
    Caskin1-CID; Caskin1 CASK-interaction domain
    cl17036
    Location:202 → 263
    SH3; Src Homology 3 domain superfamily
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases