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SHOC2 SHOC2 leucine rich repeat scaffold protein [ Meleagris gallopavo (turkey) ]

Gene ID: 100547738, updated on 8-Mar-2024

Summary

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Gene symbol
SHOC2
Gene description
SHOC2 leucine rich repeat scaffold protein
See related
Ensembl:ENSMGAG00000010857
Gene type
protein coding
RefSeq status
MODEL
Organism
Meleagris gallopavo
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Meleagridinae; Meleagris
Orthologs
human mouse all
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Genomic context

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See SHOC2 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
12
Annotation release Status Assembly Chr Location
103 current Turkey_5.1 (GCF_000146605.3) 8 NC_015018.2 (25546468..25605021)
Build 1.1 previous assembly Turkey_2.01 (GCF_000146605.1) 8 NC_015018.1 (28627486..28659621)

Chromosome 8 - NC_015018.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116216899 Neighboring gene programmed cell death 4 Neighboring gene BBSome interacting protein 1 Neighboring gene adrenoceptor alpha 2A Neighboring gene uncharacterized LOC116216900 Neighboring gene uncharacterized LOC104912011

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein phosphatase 1 binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
leucine-rich repeat protein SHOC-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Meleagris gallopavo Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Turkey_5.1 Primary Assembly

Genomic

  1. NC_015018.2 Reference Turkey_5.1 Primary Assembly

    Range
    25546468..25605021
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010714705.3 → XP_010713007.1  leucine-rich repeat protein SHOC-2

    See identical proteins and their annotated locations for XP_010713007.1

    UniProtKB/TrEMBL
    G1NEF4
    Related
    ENSMGAP00000011305.2, ENSMGAT00000012176.2
    Conserved Domains (2) summary
    PLN00113
    Location:101 → 543
    PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
    sd00033
    Location:264 → 285
    LRR_RI; leucine-rich repeat [structural motif]

  2. XM_019617815.2 → XP_019473360.1  leucine-rich repeat protein SHOC-2

    UniProtKB/TrEMBL
    G1NEF4
    Conserved Domains (2) summary
    PLN00113
    Location:101 → 543
    PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
    sd00033
    Location:264 → 285
    LRR_RI; leucine-rich repeat [structural motif]

  3. XM_019617814.2 → XP_019473359.1  leucine-rich repeat protein SHOC-2

    UniProtKB/TrEMBL
    G1NEF4
    Conserved Domains (2) summary
    PLN00113
    Location:101 → 543
    PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
    sd00033
    Location:264 → 285
    LRR_RI; leucine-rich repeat [structural motif]

  4. XM_010714706.3 → XP_010713008.1  leucine-rich repeat protein SHOC-2

    See identical proteins and their annotated locations for XP_010713008.1

    UniProtKB/TrEMBL
    G1NEF4
    Conserved Domains (2) summary
    PLN00113
    Location:101 → 543
    PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
    sd00033
    Location:264 → 285
    LRR_RI; leucine-rich repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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