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GATA-4 transcription factor GATA-4 [ Meleagris gallopavo (turkey) ]

Gene ID: 100544750, updated on 14-Dec-2023

Summary

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Gene symbol
GATA-4
Gene description
transcription factor GATA-4
See related
Ensembl:ENSMGAG00000014208
Gene type
protein coding
RefSeq status
MODEL
Organism
Meleagris gallopavo
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Meleagridinae; Meleagris
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Genomic context

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Location:
chromosome: 2
Exon count:
5
Annotation release Status Assembly Chr Location
103 current Turkey_5.1 (GCF_000146605.3) 2 NC_015012.2 (108822787..108831232)
Build 1.1 previous assembly Turkey_2.01 (GCF_000146605.1) 2 NC_015012.1 (113178366..113198757)

Chromosome 2 - NC_015012.2Genomic Context describing neighboring genes Neighboring gene farnesyl-diphosphate farnesyltransferase 1 Neighboring gene cathepsin B Neighboring gene nei like DNA glycosylase 2 Neighboring gene transcription factor GATA-4-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell fate commitment IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor GATA-4
Names
GATA-binding protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Meleagris gallopavo Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Turkey_5.1 Primary Assembly

Genomic

  1. NC_015012.2 Reference Turkey_5.1 Primary Assembly

    Range
    108822787..108831232
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010708176.2 → XP_010706478.1  transcription factor GATA-4

    UniProtKB/TrEMBL
    G1NN28
    Related
    ENSMGAP00000015026.2, ENSMGAT00000015973.2
    Conserved Domains (1) summary
    cd00202
    Location:68 → 119
    ZnF_GATA; Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C
Nucleotide Protein
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