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TMEM189 transmembrane protein 189 [ Gallus gallus (chicken) ]

Gene ID: 100538348, updated on 6-Jun-2024

Summary

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Symbol
TMEM189provided by CGNC
Full Name
transmembrane protein 189provided by CGNC
Primary source
CGNC:62088
See related
Ensembl:ENSGALG00010014611
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
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Genomic context

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See TMEM189 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
8
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 20 NC_052551.1 (14060078..14077706)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 20 NC_052592.1 (13845999..13863626)

Chromosome 20 - NC_052551.1Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 65 member C Neighboring gene uncharacterized LOC124417326 Neighboring gene uncharacterized LOC121107307 Neighboring gene CCAAT/enhancer binding protein beta Neighboring gene ubiquitin conjugating enzyme E2 V1 Neighboring gene uncharacterized LOC112530132 Neighboring gene snail family transcriptional repressor 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables plasmanylethanolamine desaturase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ether lipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
plasmanylethanolamine desaturase
NP_001192029.1
NP_001383487.1
XP_040506554.1
XP_046758732.1
XP_046758733.1
XP_046786492.1
XP_046786493.1
XP_046786494.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001205100.2 → NP_001192029.1  plasmanylethanolamine desaturase isoform 1

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000328
    UniProtKB/TrEMBL
    A0A8V0YR11
    Related
    ENSGALP00010020475.1, ENSGALT00010035071.1
    Conserved Domains (1) summary
    pfam10520
    Location:89 → 265
    TMEM189_B_dmain; B domain of TMEM189, localization domain

  2. NM_001396558.1 → NP_001383487.1  plasmanylethanolamine desaturase isoform 2

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000328

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052551.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    14060078..14077706
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040650620.2 → XP_040506554.1  plasmanylethanolamine desaturase isoform X1

    UniProtKB/TrEMBL
    A0A8V0YR11

  2. XM_046902777.1 → XP_046758733.1  plasmanylethanolamine desaturase isoform X2

  3. XM_046902776.1 → XP_046758732.1  plasmanylethanolamine desaturase isoform X2

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052592.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    13845999..13863626
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046930536.1 → XP_046786492.1  plasmanylethanolamine desaturase isoform X1

    UniProtKB/TrEMBL
    A0A8V0YR11

  2. XM_046930538.1 → XP_046786494.1  plasmanylethanolamine desaturase isoform X2

  3. XM_046930537.1 → XP_046786493.1  plasmanylethanolamine desaturase isoform X2

Nucleotide Protein Strain
Heading Accession and Version

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