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Ap-uch ubiquitin carboxyl-terminal hydrolase [ Aplysia californica (California sea hare) ]

Gene ID: 100533253, updated on 14-Dec-2023

Summary

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Gene symbol
Ap-uch
Gene description
ubiquitin carboxyl-terminal hydrolase
See related
EnsemblRapid:GeneID_100533253
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Aplysia californica
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Gastropoda; Heterobranchia; Euthyneura; Tectipleura; Aplysiida; Aplysioidea; Aplysiidae; Aplysia
Also known as
UCH
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
102 current AplCal3.0 (GCF_000002075.1) Unplaced Scaffold NW_004797373.1 (134336..151415, complement)

NW_004797373.1Genomic Context describing neighboring genes Neighboring gene sodium/glucose cotransporter 4 Neighboring gene uncharacterized LOC101864606 Neighboring gene ubiquitin carboxyl-terminal hydrolase 35 Neighboring gene uncharacterized LOC101847947

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004797373 Unplaced Scaffold Reference AplCal3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Ubiquitin C-terminal hydrolase is an immediate-early gene essential for long-term facilitation in Aplysia. Hegde AN, et al. Cell, 1997 Apr 4. PMID 9094720

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquitin carboxyl-terminal hydrolase
Names
Ubiquitin thioesterase
ubiquitin c-terminal hydrolase
NP_001191493.1
XP_012936301.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001204564.1 → NP_001191493.1  ubiquitin carboxyl-terminal hydrolase

    See identical proteins and their annotated locations for NP_001191493.1

    Status: PROVISIONAL

    Source sequence(s)
    U90177
    UniProtKB/Swiss-Prot
    O01391
    Related
    NP_001191493.1, NM_001204564.1
    Conserved Domains (1) summary
    cd09616
    Location:7 → 212
    Peptidase_C12_UCH_L1_L3; Cysteine peptidase C12 containing ubiquitin carboxyl-terminal hydrolase (UCH) families L1 and L3

RefSeqs of Annotated Genomes: Aplysia californica Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AplCal3.0 Primary Assembly

Genomic

  1. NW_004797373.1 Reference AplCal3.0 Primary Assembly

    Range
    134336..151415 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013080847.2 → XP_012936301.1  ubiquitin carboxyl-terminal hydrolase isoform X1

    Related
    XP_012936301.1, XM_013080847.2
    Conserved Domains (1) summary
    cd09616
    Location:7 → 222
    Peptidase_C12_UCH_L1_L3; Cysteine peptidase C12 containing ubiquitin carboxyl-terminal hydrolase (UCH) families L1 and L3
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O01391.1 GenPept UniProtKB/Swiss-Prot:O01391

Gene LinkOut

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Molecular Biology Databases